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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_899533_2

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 493..1233

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding S4; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 247.0
  • Bit_score: 495
  • Evalue 5.70e-137
RNA-binding S4; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] id=5080236 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 247.0
  • Bit_score: 473
  • Evalue 1.30e-130
RNA-binding protein S4 similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 244.0
  • Bit_score: 209
  • Evalue 9.60e-52

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGTCCGACACCGGCTGGTCCGAACCCCAACGCCTGGCCAAACGCCTGGCCGCCCAGCTGCCCTGTTCGCGCAGCGACGCTGAGCGCTACATCGCCGGGGGCTGGGTGCGCGTGGACGGCGTGGTGGTCGAAGAGCCCATGGCGCGGGTGCACGACGGCCAGACCGTGGCGCTGGACCCCAAGGCCAAGCTGGAGTCGCTCGACTCCGTGACGCTGATCTGGCACAAGCCAGCCGGGCTGGCCCTGCCCGACGTGTCGCCGCTGCCCGATGCACTGGCGGCCGAGCTGTTCACCAGCCAGAACCGGTTCAAGGGCGACCGCTCGGGCGTGCGCCCGCTCAAGGCCCACCGCCACAAGCTGCTGCCGGTGGCACCCTTGTCCACCCCCATGAGTGGCCTGATGGTGTTCACCCAGAACCCCGGCGTGGCGCGCAAGATCTCGGACGAGTCCGCCCAACTCGAACACGAGTGGCTGGTCGAGGTGGCGGCCGATCCCGAACTCGACGACGAAGCCCGGCGCGAGGCGGTCTTGAAGTCGATCGGCAAGGCCCTGTTTTTCGACGGCTGGAGCCTGCCCTCGGCGCGTGCGAGCTGGCAGAGCGAACACCGCCTGCGCCTGGCCATCAAGGGCACGCGGCCGGGCCAGGTGGAGCACCTGTGTGAACGGGCGGGCCTGCAACTGGTGGCGGTTCGGCGCCTGCGCATGGGCCGGGTCGCGCTCACGGGGCTGCCGGTCGGTGAG
PROTEIN sequence
Length: 247
MSDTGWSEPQRLAKRLAAQLPCSRSDAERYIAGGWVRVDGVVVEEPMARVHDGQTVALDPKAKLESLDSVTLIWHKPAGLALPDVSPLPDALAAELFTSQNRFKGDRSGVRPLKAHRHKLLPVAPLSTPMSGLMVFTQNPGVARKISDESAQLEHEWLVEVAADPELDDEARREAVLKSIGKALFFDGWSLPSARASWQSEHRLRLAIKGTRPGQVEHLCERAGLQLVAVRRLRMGRVALTGLPVGE