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RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148

Search features with annotation key words

Displaying items 91-120 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_88
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

79876..80808
-----------------
DNA (933bp)
protein (311aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_89
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(80774..82165)
-----------------
DNA (1392bp)
protein (464aa)
DNA repair protein radA n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7J939_9FUSO
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
DNA repair protein RadA
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_90
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(82158..83696)
-----------------
DNA (1539bp)
protein (513aa)
cytosol aminopeptidase (LAP) (Leucyl aminopeptidase) PepA (EC:3.4.11.1) Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
cytosol aminopeptidase (LAP) (Leucyl aminopeptidase) PepA (EC:3.4.11.1)
Probable cytosol aminopeptidase id=4579723 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_91
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(84031..84627)
-----------------
DNA (597bp)
protein (199aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_92
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

84851..85483
-----------------
DNA (633bp)
protein (211aa)
uracil phosphoribosyltransferase (EC:2.4.2.9) Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase Upp n=1 Tax=Clostridium sp. CAG:354 RepID=R7F4Z8_9CLOT
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_93
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

85483..86808
-----------------
DNA (1326bp)
protein (442aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL) RepID=E4Q1K6_CALOW
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_94
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

87019..87726
-----------------
DNA (708bp)
protein (236aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_95
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

88061..91555
-----------------
DNA (3495bp)
protein (1165aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta id=4306061 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_96
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

91512..93422
-----------------
DNA (1911bp)
protein (637aa)
DNA-directed RNA polymerase subunit gamma (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
DNA-directed RNA polymerase subunit gamma (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Clostridium sp. CAG:306 RepID=R6PAT8_9CLOT
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_97
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

93447..97148
-----------------
DNA (3702bp)
protein (1234aa)
rpoC2; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
amr:AM1_3594 rpoC2; DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=19102 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
rpoC2; DNA-directed RNA polymerase delta subunit RpoC2 (EC:2.7.7.6)
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_98
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(97135..98382)
-----------------
DNA (1248bp)
protein (416aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_99
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(98555..99733)
-----------------
DNA (1179bp)
protein (393aa)
trpB; tryptophan synthase subunit beta; K01696 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Tryptophan synthase beta chain id=4581331 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
trpB; tryptophan synthase subunit beta
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_100
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

99786..100919
-----------------
DNA (1134bp)
protein (378aa)
glycerate kinase; K00865 glycerate kinase [EC:2.7.1.31] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Glycerate kinase subfamily protein n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R7I7_9THEO
glycerate kinase
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_101
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

101066..101377
-----------------
DNA (312bp)
protein (104aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_102
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(101378..102397)
-----------------
DNA (1020bp)
protein (340aa)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA023-J06 RepID=UPI000380B258
oligopeptide/dipeptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
peptide ABC transporter substrate-binding protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_103
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(102397..102915)
-----------------
DNA (519bp)
protein (173aa)
pyrR; Pyrimidine operon attenuation protein; K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Uracil phosphoribosyltransferase / Pyrimidine operon regulatory protein PyrR (EC:2.4.2.9)
Bifunctional protein PyrR id=4513175 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_104
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

103066..104886
-----------------
DNA (1821bp)
protein (607aa)
fadD; Long-chain acyl-CoA synthetase Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
ial:IALB_1068 fadD; Long-chain acyl-CoA synthetase id=719012 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
fadD; Long-chain acyl-CoA synthetase
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_105
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

104939..106282
-----------------
DNA (1344bp)
protein (448aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_106
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

106257..107387
-----------------
DNA (1131bp)
protein (377aa)
ribD; riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.
ribD; riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F2Y4_CLOSG
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_107
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

107489..108118
-----------------
DNA (630bp)
protein (210aa)
Carbohydrate-selective porin n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RW73_SYNP3
carbohydrate-selective porin Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
carbohydrate-selective porin
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_108
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

108158..108913
-----------------
DNA (756bp)
protein (252aa)
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WNW5_9CYAN
phosphohydrolase Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
phosphohydrolase
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_109
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(108897..109115)
-----------------
DNA (219bp)
protein (73aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_110
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(109112..111136)
-----------------
DNA (2025bp)
protein (675aa)
Ferrous iron transporter FeoB n=1 Tax=Clostridium sp. BNL1100 RepID=H2JEF1_9CLOT
ferrous iron transporter FeoB; K04759 ferrous iron transport protein B Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
ferrous iron transporter FeoB
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_111
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

111268..112989
-----------------
DNA (1722bp)
protein (574aa)
potassium-transporting ATPase subunit A (EC:3.6.3.12); K01546 K+-transporting ATPase ATPase A chain [EC:3.6.3.12] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
potassium-transporting ATPase subunit A (EC:3.6.3.12)
K+-transporting ATPase, KdpA id=1951142 bin=GWE2_RBX1_39_32 species=Methanobacterium sp. Maddingley MBC34 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_112
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

112999..115035
-----------------
DNA (2037bp)
protein (679aa)
potassium-transporting ATPase subunit B (EC:3.6.3.4); K01547 K+-transporting ATPase ATPase B chain [EC:3.6.3.12] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
potassium-transporting ATPase subunit B (EC:3.6.3.4)
Potassium-transporting ATPase B chain id=1951141 bin=GWE2_RBX1_39_32 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_113
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

115056..115613
-----------------
DNA (558bp)
protein (186aa)
potassium-transporting ATPase C chain (EC:3.6.3.12); K01548 K+-transporting ATPase ATPase C chain [EC:3.6.3.12] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
potassium-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain n=1 Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BJD3_THEXL
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_114
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

115803..116894
-----------------
DNA (1092bp)
protein (364aa)
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI00037B3A84
hypothetical protein; K07089 Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_115
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(117004..117120)
-----------------
DNA (117bp)
protein (39aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_116
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

117429..118037
-----------------
DNA (609bp)
protein (203aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein GobsU_24461 id=2940047 bin=GWF2_Verrucomicrobia_51_19 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Verrucomicrobia_51_19 organism_group=Verrucomicrobia organism_desc=Good +
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_148_117
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

118041..118913
-----------------
DNA (873bp)
protein (291aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein GobsU_24456 id=2940051 bin=GWF2_Verrucomicrobia_51_19 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Verrucomicrobia_51_19 organism_group=Verrucomicrobia organism_desc=Good +
hypothetical protein
Displaying items 91-120 of 125 in total

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