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RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_69235_7

Organism: Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_19

partial RP 36 / 55 MC: 2 BSCG 37 / 51 MC: 1 ASCG 10 / 38
Location: comp(2407..3036)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor id=4751264 bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 210.0
  • Bit_score: 414
  • Evalue 7.70e-113
sigW5; ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Rokubacteria_70_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 209.0
  • Bit_score: 414
  • Evalue 1.10e-112
sigW5; ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 192.0
  • Bit_score: 150
  • Evalue 4.50e-34

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Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGGTGACCAGACCGGACGAGGTGGGACGGGCGCCCTCGGGGCGGGTCGATCCGGACGCGGTCCTTCTCGAGCGGCTGCGGCGTGAGGATCCCGAGGCTCCGGAGCAGCTCGTCGCCACCTATGGCGATCGCGTCTACCGGCTGGCGATCCGCATCACCAGCAACCAGCAGGACGCCGAAGAGGTGGTGCAGGACGCCCTCTGGACCGCGGCGCGGAAGATCCACACGTTCAAGGGGGAGTCGGCCTTTGGCAGCTGGCTCTACCGTATCACGGCCAACGCGGCCTACCAGAAGCTCCGGGGCCGGCAGGGCAAGCGGAACGAGGTGTCCTGGGAGGATCTGCTCCCTGCCTTCGACGATCTCGGGAAGTACGCCGATCCCGTGGGGGACTGGTCGGCCAAGGTCGAGGAACCGGCGCTGCAGACCGAGCTCAGGACCGTCCTGACGGCGGCCATCGGCGAGTTGCCGCTGGACTACAGGACCGCCTTCCTCATGCACGACGTCGAAGGGCTTTCGAACCCCGAGATCGCCGAGGCGCTCGGGATCAGCCTGCCCGCCGTCAAGTCGCGCGTGCACCGTTCGCGCCTCTTCCTCAGGCAACGGCTTTCCCGCTACCTCGCGGCAGCCTAG
PROTEIN sequence
Length: 210
MVTRPDEVGRAPSGRVDPDAVLLERLRREDPEAPEQLVATYGDRVYRLAIRITSNQQDAEEVVQDALWTAARKIHTFKGESAFGSWLYRITANAAYQKLRGRQGKRNEVSWEDLLPAFDDLGKYADPVGDWSAKVEEPALQTELRTVLTAAIGELPLDYRTAFLMHDVEGLSNPEIAEALGISLPAVKSRVHRSRLFLRQRLSRYLAAA*