ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_16289_19

Organism: Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_19

partial RP 36 / 55 MC: 2 BSCG 37 / 51 MC: 1 ASCG 10 / 38
Location: comp(17827..20106)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein assembly factor BamA id=2875192 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 760.0
  • Bit_score: 1492
  • Evalue 0.0
Surface antigen (D15) Tax=GWC2_Rokubacteria_70_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 759.0
  • Bit_score: 1492
  • Evalue 0.0
Surface antigen (D15) similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 766.0
  • Bit_score: 514
  • Evalue 7.30e-143

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 2280
ATGACCGCCCTGGAGAGAGCCTTTCTCTCCATTTTTCTTGCCTGTGCCCTGCTGGGTCCGGGCCTCGCCCTGGCCCAGCAGGCGGCCCCCGGCGCCGAGCGGCCCATCGTCGTGAAGGAGCTCGCGGTGCAGGGGAACCGCCGCGTCCAGGAGGCCGTCGTCCTGGGCCGCGTGACCACGCGGGTGGGGGCGCAGTTCCAGCCGGCCCGGCTCGCCGAGGACATCCGGGCGGTCTTCGCGCTCGGCTTCTTCGATGACGTGCAGATGAGGGTCGAGGACTTCGAGGGCGGCGTGAAGGTGACCTTCGTCGTGGTCGAGCGCCCCTTCGTGCGCGACATCCAGTTCGCGGGGAACAAGAAGGTGGACACCGCCGCGCTGCAGGAGAAGATCGACCTCAAGCTCGGCAGCGTCTACAACCCGGTGGAGGTCAACCGGGCGGCCGAGCGGCTGAAGGAGCACTACGAAGAGGAGGGGTACTTCGAGGTCACCATCGGGCCCGACGCCGAGAAGCTCCCCGACGGCGACGTGACCGTGGTCTTCCGGATCGCCGAGGGTCGCAAGATCACCATCGACCAGATCGTGATCGAGGGAGCCCAGGGGCTCACGCCGAAACAGGTCAAGGCCGTCATGGCGACCCAGGAGCGCCAGTTCTGGGTCCTCCGGGGCACCGTCCAGCGGCAGAAGCTCGACGACGATGCCGAGCGGATCATCTCCCTCTACAACGACCACGGCTACACCCAGGCGCGCGTGGAGTCCTCCGAGATCCAGCTGGACACGACGAAGGCCCGGGTGACGGTCCGCATCGTGGTGGTGGAGGGAGCGCAGTTCAAGGTCGGCGGCGTGGACGTGACGGGGAACGCCGTCCTGCCGACGGAGGAGATCCGCCGGCGCATCAAGGTCCGGACGGACGACGTCTTCTCCCGGTCGAAGCTCCGCGAGAGCGTCAAGGGGATCCAGGACCTGTACGGCGTCATCGGCCGCGCCTCGGCCGACGTGAACCCCACGGCGACCCAGGACGCGGCCGCGCGACGGGTCAACATCGCCTTCGAGATCGCCGAGGGGCCCGAGGTGTTCGTGGAACGGATCAACATCTCGGGCAACAGCCGCAGCCAGGAGAAGATCCTCCGCCGCGAGATCCCCATGCACGAGGGGGATCTCTTCACGACGAAGGCCCTGGAGCGCGCGCGGCAGAAGCTCAGCAACCTCGGGTACTTCGACCAGGTCCGGGCCACCACGGCGCCGGGCTCGACGAAGGACAAGATCGTCGTGAACATCGAGGTCACGGAGAAGCCCACGGGGCTCTTCTCCATCGGCGGTGGCTACAGCTCCCAGGACAGCTTCATCGGCACCGTGGACCTGTCGCAGCGCAACTTCCTCGGACGCGGTTGGGAGGTGTTCCTGCGCTTGCGCGCCGGCGCCAGCACCCAGCAGGGCACCATCGGCTTCACCGAGCCGTGGCTCTTCGACAGGCCGCTGGCCGCCGGCTTCGACCTCTTCAACAACCGGCGCGTCTACCCCGAGTACACGATCAACTCGCTCGGGGGCGACATCCGGCTCGGCCACCCGCTGGGCGACTACTCGCGGTGGGGCCTCATCTACCGCGTCACCGAGGACGAGATCTCCGACATCGCGACCAACGCCAGCACGAACCTGCTCAGCGAGGAAGGCAAGCGCCTCACCTCGCTCATCGGCGGGAGCCTCTCCCGGGACACGCGCGACAGCGTCTTCGAGCCCACGCGAGGCGGCAGCTCGAGCGTCGGGCTGGACTTCGCAGGGGTCGGCTTCGGCGACAGCAAGTTCGTGCGGGCCGCGGCCAGCACCGCCTACTTCCAGTCGCTCTGGCTCGACCACGTCCTGAGCGGGCGGCTCCAGGGCGGCTACGCCTTCGGGTGGTCCGACGAGCCGGTGCCGCTCTTCGAGCGCTTCTACCTGGGCGGCCCCAACTCGATCCGCAGCCGAAAGAGCCGCGCGATCTCCCCGACGGACAGCAGCGGGACCAGGATCGGCGGCAACAGCCAGCTCCTCGGGAACGTGGAGTACCTCGTCCCGCTCCCCTTCAGCGTCCGGGCCGCGCTCTTCTACGACGTCGGCAACGTCTACGGCCCCGACATCGCCGTGGGGGAGAAGTTCGACCCGCTGGACCTGCGGCACGCGGCGGGCCTCGGCGTCCGGTGGGCCTCGCCCTTCGGGCCGCTGCGGCTGGACTATGGGGTCAACCTCGATCGGCGAACCGGAGAGAAGTTCGGCCAGTTCCACTTCTCGGTCGGCTCCCCGTTCTGA
PROTEIN sequence
Length: 760
MTALERAFLSIFLACALLGPGLALAQQAAPGAERPIVVKELAVQGNRRVQEAVVLGRVTTRVGAQFQPARLAEDIRAVFALGFFDDVQMRVEDFEGGVKVTFVVVERPFVRDIQFAGNKKVDTAALQEKIDLKLGSVYNPVEVNRAAERLKEHYEEEGYFEVTIGPDAEKLPDGDVTVVFRIAEGRKITIDQIVIEGAQGLTPKQVKAVMATQERQFWVLRGTVQRQKLDDDAERIISLYNDHGYTQARVESSEIQLDTTKARVTVRIVVVEGAQFKVGGVDVTGNAVLPTEEIRRRIKVRTDDVFSRSKLRESVKGIQDLYGVIGRASADVNPTATQDAAARRVNIAFEIAEGPEVFVERINISGNSRSQEKILRREIPMHEGDLFTTKALERARQKLSNLGYFDQVRATTAPGSTKDKIVVNIEVTEKPTGLFSIGGGYSSQDSFIGTVDLSQRNFLGRGWEVFLRLRAGASTQQGTIGFTEPWLFDRPLAAGFDLFNNRRVYPEYTINSLGGDIRLGHPLGDYSRWGLIYRVTEDEISDIATNASTNLLSEEGKRLTSLIGGSLSRDTRDSVFEPTRGGSSSVGLDFAGVGFGDSKFVRAAASTAYFQSLWLDHVLSGRLQGGYAFGWSDEPVPLFERFYLGGPNSIRSRKSRAISPTDSSGTRIGGNSQLLGNVEYLVPLPFSVRAALFYDVGNVYGPDIAVGEKFDPLDLRHAAGLGVRWASPFGPLRLDYGVNLDRRTGEKFGQFHFSVGSPF*