ggKbase home page

RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_138990_3

Organism: Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_19

partial RP 36 / 55 MC: 2 BSCG 37 / 51 MC: 1 ASCG 10 / 38
Location: 1543..2640

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-E factor Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 363.0
  • Bit_score: 669
  • Evalue 3.30e-189
RNA polymerase sigma-E factor id=4243667 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 348.0
  • Bit_score: 636
  • Evalue 1.70e-179
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 169.0
  • Bit_score: 150
  • Evalue 7.80e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1098
GTGCCGGGAGACGACGAGCTCATCCGCCGCTGCCGGGCGGGAGACGTGGCGGCCTTCGAGCCGCTGGTGGAGAAGTACCGCCAGCGGGTGTGGCGGCTCGCGTATCAGGTCCTGCGGGACAAGGAGGACGCATGGGATTGCGCCCAGGAGGCCTTCGTGCGGGCCTTCCAGTCGCTGCCGGCCTTCCGCGGCCAGTCGGCGTTCTACACGTGGCTCTTCCGGATCACGGTCAACGTGGCCACCGACCGCCACCGCGCCCGAGGAGCGCGCGCGCGGGCCTTCGGCGCCGAGCAGGTGCCCGAGGAGGAGTGGGCGCGCACGGCGGCGGACCACGGCGCGACGCCCGACCAGGCCGCGATCCAGGCCGAGAAGCGCGAGCGCATCCGCCGCGCCCTCGACGCCTTGCCGCTCAAGTACCGAACCATTATCATGCTGAGTGATGTCGAGGGCCTGTCGTACCGCGAGATCGCCCAGGTGCTGAGCTGCCCCATCGGGACGGTCATGTCGCGGCTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCTGACAATCGTCTTCTGGCTTGCTGTCACCCTCGTCGCGGCCGCGGCGCCCGTCCAGGCCGAGCAAATGATCCGCTTCGGCGTGCGCGTGCTCCAGGCCTCGAGTCCGGCCTCACCGCCGCCCCCGGCGACGGCCGCCGTGCCGGGGCAGCGCCACCTGGTCCCGCCCTCGGCGGCTCCGGCGCCGCCGCCCTCGGCCTTGCCGGAGGGCGAGCCGGACGAGCGGCTCCGACTGATCCTGCCGCGGCTGCGCACACTCTTCCGCTACACCGAGTACACGACGCTCGACCGCCAGCGCGCGGAGGTTGCGCTCGGCACCCGGCAGCGCTTCCTGCTGCCGGGTGCGCGCCAGCTCGAGGTCACGCCCGACCAGCTCCACGGCCAGTCGGTGCGCATGCGGGTGCGGCTCCTCCACGGGGAACAGCCGGAGCTGCGCATGAGCATCGTGGCGGCGCCCGGCGCCCCGGCGGTGCTCGGGGGACCTGCGCACGGCGACGGCGTCCTGATCATCATCCTCTGGGCGAATCCGAACCCCCGCAACTGA
PROTEIN sequence
Length: 366
VPGDDELIRRCRAGDVAAFEPLVEKYRQRVWRLAYQVLRDKEDAWDCAQEAFVRAFQSLPAFRGQSAFYTWLFRITVNVATDRHRARGARARAFGAEQVPEEEWARTAADHGATPDQAAIQAEKRERIRRALDALPLKYRTIIMLSDVEGLSYREIAQVLSCPIGTVMSRXXXXXXXXXXXXXXXLTIVFWLAVTLVAAAAPVQAEQMIRFGVRVLQASSPASPPPPATAAVPGQRHLVPPSAAPAPPPSALPEGEPDERLRLILPRLRTLFRYTEYTTLDRQRAEVALGTRQRFLLPGARQLEVTPDQLHGQSVRMRVRLLHGEQPELRMSIVAAPGAPAVLGGPAHGDGVLIIILWANPNPRN*