ggKbase home page

RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_50963_4

Organism: Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_69_21

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 3479..3853

Top 3 Functional Annotations

Value Algorithm Source
Fimbrial protein pilin Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 126.0
  • Bit_score: 195
  • Evalue 3.60e-47
Putative Fimbrial protein pilin id=4953732 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 127.0
  • Bit_score: 184
  • Evalue 5.90e-44
Fimbrial protein pilin similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 149.0
  • Bit_score: 92
  • Evalue 1.10e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGGCACGACGGCTGATGAAGCCCCGTTTCCCCCGGGGGCAGCGCGGGTTCACGCTGATCGAGCTGATGATCGTCGTCGCGATCATCGGCATCCTCGCAGCCATCGCCATCCCGCTGTACGCCAACGTCCAGGCCCGCGCTCGCGTGGCGAAGGCGCAAGCCGATGCGCGCTCGATCGCGGCCGCCGTCTCGCTGTATCAGGCGCACATGTCGACGGTGCCGAATGCGCTCGGCGACCTGACCGCGGTCGCGACCAACGGCCTGGGCCAGACGGCAGGACCCTTCCTGGCCTCGGTGCCCAGCCCGCCGGCCGGCTGGGCGACGCCGTACTCGTACACACCGAACACCGCCAGTGATATCTGGTCGATCTCCGCG
PROTEIN sequence
Length: 125
MARRLMKPRFPRGQRGFTLIELMIVVAIIGILAAIAIPLYANVQARARVAKAQADARSIAAAVSLYQAHMSTVPNALGDLTAVATNGLGQTAGPFLASVPSPPAGWATPYSYTPNTASDIWSISA