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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_600_13

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 11191..11733

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BSF7_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 180.0
  • Bit_score: 355
  • Evalue 3.70e-95
sigma-70 family RNA polymerase sigma factor Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 360
  • Evalue 1.20e-96
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 180.0
  • Bit_score: 355
  • Evalue 1.00e-95
  • rbh

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGGGGATGACTGTTCAGTGCAAGGATCAATGGGCCGCCGATGACCGTTTGTTCGAAGCGAGTTGGCGCGCTGTGCACGGCGAGCTCAGGCGCCGGGCGTTGCGGCGGGCCAAGGGCAATCTGGATCAGGGCCAGGAGTGGTTGGCGGCCACGGCGATCAAGGCCCTGTTGTTTTTTCGGCGCTCGCCCGAGCGCATTCGCGACCCTGAGGGGTTTCTGTTTCTGGTGCTCGATCATGTGTTTCTCGACAGCTTGCGACGCAGCAAGCGCGAGGGGCGGCTGTTCGATGATTCGGTGGACCTTGAACACGATCACCTGGCCGCACTCGCCGCGCCCTGCGCCTCGGTGCTGGAGCGGGTGGAATGTTATGAGCGCCTGGAGCAGATCGAGGCGCACGTCGCACGGTTACCGCTGTTGCAGCAGCGCTTGTTCGAGATGCGTTTCGTCGATGACCTGCCTTACCCGCAAATTGCCGCCGAGCTGCACGTGAAGCTGCCGCTGGTGCGCAAGCGTGTGCAACTGCTGCGCAGTGCCTTGCGCTGA
PROTEIN sequence
Length: 181
MGMTVQCKDQWAADDRLFEASWRAVHGELRRRALRRAKGNLDQGQEWLAATAIKALLFFRRSPERIRDPEGFLFLVLDHVFLDSLRRSKREGRLFDDSVDLEHDHLAALAAPCASVLERVECYERLEQIEAHVARLPLLQQRLFEMRFVDDLPYPQIAAELHVKLPLVRKRVQLLRSALR*