ggKbase home page

RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_282846_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 2..1354

Top 3 Functional Annotations

Value Algorithm Source
Heavy metal efflux pump CzcA n=1 Tax=Pseudomonas sp. Ag1 RepID=J1IDW9_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 451.0
  • Bit_score: 878
  • Evalue 4.10e-252
cation transporter similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 451.0
  • Bit_score: 878
  • Evalue 1.10e-252
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:EJF69417.1}; TaxID=1197727 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 451.0
  • Bit_score: 878
  • Evalue 5.70e-252

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. Ag1 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1353
CACGTGATGACTGAAGCGGCTGCCGAGGTAGGACCTGCATTGTTCTTCTGTCTGCTGATCATCACCCTGTCGTTCATTCCGGTGTTCACGCTGGAGGCCCAGGAAGGACGTCTATTCGGTCCATTAGCGTTTACCAAAACCTACGCTATGGCCGCGGCGGCTGGACTGTCGGTAACTCTCGTACCGGTGTTGATGGGGTATTGGATTCGTGGACGAATTCCCAATGAGCAACAGAATCCGCTAAATCGCTGGTTGATCCGGATCTACGAGCCCGCTCTGGACGCCGTATTACGTCGACCTAAAGTAACGCTGCTGGTTGCGTTGCTAGTCTTTGTCAGCGCGTTGTGGCCGATCTCTCGTCTGGGTGGTGAGTTTCTTCCCCCGCTGGACGAAGGCGACCTGCTCTATATGCCATCAGCTCTGCCTGGATTATCGGCGCAGAAGGCAGCGCAACTGCTTCAACAGACTGACCGTCTGATAAAGACAGTTCCAGAGGTCGAACACGTTTTCGGAAAAGCCGGCCGCGCTGAAACCGCGACTGACCCCGCACCTTTGGAAATGTTCGAGACCACCATCCAATTCAAACCACACGAGCAGTGGCGCCCAGGCATGACCCAAGAAAAGCTCGTTGAGGAGCTAGACCAAGTGGTGCGTGTCCCAGGATTGACCAACATCTGGATACCGCCGATTCGTAACCGCATCGACATGCTGGCCACTGGCATAAAAAGCCCTATTGGTGTGAAGGTTGCCGGTACCAACCTGACGGAGATCGATGCCGTCACCCAAGCCATCGAACGTGTTGCCAAGGACGTCTCAGGTGTGAGTTCAGCGTTGGCCGAACGACTGACCGGTGGCCGCTATATTGATGTGGATATCGATCGTAAAGCTGCGGCCCGTTATGGGTTAAATATTGCCGATGTGCAATCGATCGTGGCCGGCGCAATCGGCGGTGAAAATGTCGGGGAGACGATTGAAGGGTTGGCTCGTTTCCCAATTAACGTACGTTACCCTCGTGAGTGGCGGGATTCGCTCGGCGCTTTGGAGCAGTTGCCGATCTACACCCCGCTAGGCAGCCAGATCACCCTTGGCACCGTTGCGAAGATCAAGGTCAGCGATGGTCCGCCGATGCTTAAGAGTGAAAACGCCCGACCTTCAGGCTGGGTGTACATCGACGTGCGGGGACGGGATATTGCTTCGGTAGTCGCCGATCTACGACGGGTCGTCAGCGAGCAGGTTAAGTTGCAGCCTGGTATGAGCTTGAGCTACGCAGGACAGTTCGAATTTCTCGAAAGGGCCAACGCACGACTCAAGCTGGTGGTGCCTGCCACGCTGTTGATCATCTTCGTGCTGCTT
PROTEIN sequence
Length: 451
HVMTEAAAEVGPALFFCLLIITLSFIPVFTLEAQEGRLFGPLAFTKTYAMAAAAGLSVTLVPVLMGYWIRGRIPNEQQNPLNRWLIRIYEPALDAVLRRPKVTLLVALLVFVSALWPISRLGGEFLPPLDEGDLLYMPSALPGLSAQKAAQLLQQTDRLIKTVPEVEHVFGKAGRAETATDPAPLEMFETTIQFKPHEQWRPGMTQEKLVEELDQVVRVPGLTNIWIPPIRNRIDMLATGIKSPIGVKVAGTNLTEIDAVTQAIERVAKDVSGVSSALAERLTGGRYIDVDIDRKAAARYGLNIADVQSIVAGAIGGENVGETIEGLARFPINVRYPREWRDSLGALEQLPIYTPLGSQITLGTVAKIKVSDGPPMLKSENARPSGWVYIDVRGRDIASVVADLRRVVSEQVKLQPGMSLSYAGQFEFLERANARLKLVVPATLLIIFVLL