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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_415_8

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(5755..6756)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Pseudomonas fluorescens WH6 RepID=E2XMJ2_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 333.0
  • Bit_score: 647
  • Evalue 8.60e-183
yeiE; HTH-type transcriptional regulator YeiE Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 333.0
  • Bit_score: 653
  • Evalue 1.30e-184
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 328.0
  • Bit_score: 643
  • Evalue 4.60e-182

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
TTGCACAGCATTCTAATGGCGGCGACAATATCTGTTAACTGGATTATTAAGATAAGGGTTATCGGTTATATCGATATGCGATTTACTCTCCGTCAACTGCAAGTTTTCGTCGCCGTCGCCCAGCAGGAAAGCGTCTCGCGCGCTGCTGGCCTTCTGGCCTTATCTCAATCCGCCGCCAGCACCTCAATCACCGAGCTGGAGCGTCAATCCAGCTGTCAATTATTCGACCGCGCCGGTAAACGCCTGAGCCTCAACGCCCTCGGTCACCAGCTGTTGCCCCAGGCGGTGGCATTGCTGGACCAGGCCAAGGAGATCGAAGACCTGCTCAACGGCAAGTCAGGCTTCGGTTCCCTGGCGGTCGGCGCCACGCTGACCATAGGCAATTACTTGGCGACGCTGCTGATTGGCAGCTTTATGCAGCAACACCCCGAGAGCCAGGTAAAGCTGCATGTGCAGAACACTGCCCATATCGTGCATCAGGTTGCCCACTACGAAATTGACCTGGGTCTAATTGAAGGCGACTGCAGCCACCCGGATATCGAGGTGCAGACGTGGGTAGAAGATGAGCTGGTGGTGTTCTGTGCGCCCCAGCATCATTTGGCCAAGCGTGGCGTGGCCACCATGGACGAGTTGACCCACGAAGCGTGGATCCTGCGGGAACAGGGCTCGGGCACGCGACTGACCTTTGATCAGGCAATGCGTCATCACCGCAGCGCGCTGAATATCCGCCTGGAGCTGGAACACACCGAGGCGATCAAACGGGCAGTGGAGTCGGGCTTGGGGATTGGCTGCATTTCGCGGCTGGCGCTGCGCGATGCCTTCCGCCGTGGCAGCCTGGTGCCGGTAGAAACCCCGGACCTGGACCTGGCCCGGCAGTTCTACTTCATCTGGCACAAGCAGAAGTACCAGACCTCGGCGATGCGCGAGTTTCTCGAACTGTGCCGCGCCTTCACCGCTGGGGTGCAGCGCAGCGACGAGATCGTGCTGCCGAGTATCGCTTGA
PROTEIN sequence
Length: 334
LHSILMAATISVNWIIKIRVIGYIDMRFTLRQLQVFVAVAQQESVSRAAGLLALSQSAASTSITELERQSSCQLFDRAGKRLSLNALGHQLLPQAVALLDQAKEIEDLLNGKSGFGSLAVGATLTIGNYLATLLIGSFMQQHPESQVKLHVQNTAHIVHQVAHYEIDLGLIEGDCSHPDIEVQTWVEDELVVFCAPQHHLAKRGVATMDELTHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRAVESGLGIGCISRLALRDAFRRGSLVPVETPDLDLARQFYFIWHKQKYQTSAMREFLELCRAFTAGVQRSDEIVLPSIA*