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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_415_14

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(10438..11763)

Top 3 Functional Annotations

Value Algorithm Source
rimO; ribosomal protein S12 methylthiotransferase RimO (EC:2.1.1.- 2.8.1.-) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 441.0
  • Bit_score: 900
  • Evalue 1.10e-258
rimO; ribosomal protein S12 methylthiotransferase RimO (EC:2.1.1.- 2.8.1.-) similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 438.0
  • Bit_score: 893
  • Evalue 2.60e-257
ribosomal protein S12 methylthiotransferase n=1 Tax=Pseudomonas tolaasii RepID=UPI000311B887 similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 438.0
  • Bit_score: 893
  • Evalue 9.10e-257

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1326
ATGAGTAATAATCCACGTGTAGGGTTTGTATCGCTAGGGTGCCCGAAGGCGCTTGTCGACTCCGAGCGCATCCTCACGCAATTGCGTATGGAAGGCTACGACGTCGTGTCCACTTACCAGGACGCCGATGTGGTGGTGGTCAACACCTGCGGCTTCATCGACTCGGCCAAGGCCGAATCCCTGGAAGTGATCGGCGAAGCCATCAAGGAAAACGGCAAGGTCATCGTGACCGGCTGCATGGGGGTGGAAGAAGGCAATATCCGTAACGTGCACCCGAGTGTGCTGGCGGTGACCGGTCCGCAGCAGTACGAGCAAGTGGTCAACGCTGTGCACGAGGTGGTGCCGCCACGCCAGGATCACAACCCGCTGATCGACCTGGTGCCGCCTCAAGGCATCAAGCTGACCCCACGCCACTACGCGTATCTGAAGATTTCCGAAGGCTGCAACCACAGCTGCAGCTTCTGCATAATCCCGTCGATGCGCGGCAAACTGGTAAGCCGCCCGGTGGGTGATGTGCTCGACGAGGCCCAGCGTCTGGTCAAGTCTGGCGTCAAGGAACTGCTGGTGATCTCCCAGGACACCAGCGCCTACGGCGTCGATGTGAAATACCGCACCGGTTTCTGGAATGGCGCGCCGGTGAAAACCCGCATGACCGAGCTGTGCGAAGCCCTCAGCAGCCTGGGCGTGTGGGTGCGCCTGCACTATGTTTACCCTTACCCGCACGTGGACGAGTTGATCCCGTTGATGGCCGCCGGCAAGATCCTGCCGTACCTGGACATCCCGTTCCAGCACGCCAGCCCTAAAGTGCTCAAGGCGATGAAACGCCCGGCGTTTGAAGACAAGACCCTGGCACGCATCAAGAACTGGCGCGAGATCTGCCCGGAGCTGATCATCCGCTCCACCTTCATCGTCGGTTTCCCCGGCGAGACCGAGGAAGACTTCCAGTACCTGTTGGACTGGCTGACCGAAGCGCAGCTAGACCGCGTCGGTTGCTTCCAGTACTCGCCGGTGGAAGGTGCTCCGGCCAACCTGCTGGACTTGGCCGTGGTACCGGACGACGTCAAGCAAGACCGTTGGGAGCGCTTCATGGCGCACCAACAGGCGATCAGCTCGGCACGCCTGCAACTGCGCATCGGCAAGGAAATCGAAGTGCTGATCGATGAAGTCGACGAGCAAGGCGCGGTGGGTCGTTGCTTCTTCGACGCCCCTGAAATTGACGGTAACGTGTTTATCGACGATGCCAGCGGCCTGAAGCCGGGTGACAAAGTCTGGTGCACCGTGACCGACGCCGACGAGTACGACTTGTGGGCTGAAAAGCGCGACTGA
PROTEIN sequence
Length: 442
MSNNPRVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDSAKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLAVTGPQQYEQVVNAVHEVVPPRQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDEAQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSSLGVWVRLHYVYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWREICPELIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDLAVVPDDVKQDRWERFMAHQQAISSARLQLRIGKEIEVLIDEVDEQGAVGRCFFDAPEIDGNVFIDDASGLKPGDKVWCTVTDADEYDLWAEKRD*