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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_415_27

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 23493..24515

Top 3 Functional Annotations

Value Algorithm Source
Capsid protein n=1 Tax=Pseudomonas fluorescens EGD-AQ6 RepID=U1UZ66_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 339.0
  • Bit_score: 651
  • Evalue 6.10e-184
prophage PSPPH06, major capsid protein P2 family Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 340.0
  • Bit_score: 670
  • Evalue 1.80e-189
capsid protein similarity KEGG
DB: KEGG
  • Identity: 96.5
  • Coverage: 340.0
  • Bit_score: 647
  • Evalue 1.90e-183

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1023
ATGGCCCAGCCTTTAAGCGCCCGTGGCGCCAAGCAATATGCAGAGCTGCAGGAAGCGATCGCCGAAGCGTATGGCGTCCAAAGTTCGGCCCGCATGTTCAGCGTCGACCCGACGATTGCCCAGGAACTGAACGACGCAATCACCGCGAAAGCCGACTTCCTGGAACGTATCAACGTCGTCCCGGTGAGTGAGATTAAGGGCGAAAAAGTCTTTATCGGCGTGAATGGCCCGGTCACTGGCCGCACCAATACCAAGACCACCGACCGCGAAGCCAAGGACGCCTCGGCGCTGGACAATACCACCTACGAACTGGCTGATACTCAGTCGGACGTGGGCCTGCCATACGCCAAGATCGACGCCTGGGCGAAGTTTCCCGACTTCAAAGAGCGCTATTCCGCTGCAGTGCAAAAACGCATTGCCCAGGACCGTATCGTTATAGGCTTCCACGGAACCCGTGCCGCCCCTCAGACCGATCTGGCGGCCAATCCAAAGCTGCAGGACGTGAACAAGGGCTGGCTGCAGCAACTGCGCGAGCAGGCCCCGCAGCAGGTGCTTAAAGAGGGCGCCACCGCCGGCAAGGTGACGTTGGGCGCAGGTGGTGACTACGCCAACCTTGATGCCCTGGTGCACGACACCAAGCAGATGGTGGACGAGATCCTGCGCGAAGACGGCGACCTGGTCGCGATCATCGGCACTGACTTGCTCGCCTCTGACAAGGCCAAGCTGTACACCAAGCAAGGCGACACGCCCACCGAAAAAGAGCGCATCGAAAACGCCCAGGTGATTGCGACTTATGGTGGCCTGCCAGCTTTCAGCGTGCCGAACTTCCCGGTCAACGCAGTGCTGGTCACCAGTTGGGACAACCTGTCGATCTACTACCAGGACACCAGCTGGCGTAAGCAGACGATCGAGAACCCGAAGCGCTCCCGCGTCGAGGACTACAACAGCCGCAACGAAGGCTACGTGATCGAGCAGCTGGAAAAGATCGCGTTCACTGAAAACGTTGAATTGGTGGCGGCGTGA
PROTEIN sequence
Length: 341
MAQPLSARGAKQYAELQEAIAEAYGVQSSARMFSVDPTIAQELNDAITAKADFLERINVVPVSEIKGEKVFIGVNGPVTGRTNTKTTDREAKDASALDNTTYELADTQSDVGLPYAKIDAWAKFPDFKERYSAAVQKRIAQDRIVIGFHGTRAAPQTDLAANPKLQDVNKGWLQQLREQAPQQVLKEGATAGKVTLGAGGDYANLDALVHDTKQMVDEILREDGDLVAIIGTDLLASDKAKLYTKQGDTPTEKERIENAQVIATYGGLPAFSVPNFPVNAVLVTSWDNLSIYYQDTSWRKQTIENPKRSRVEDYNSRNEGYVIEQLEKIAFTENVELVAA*