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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3986_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 55..318

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase omega subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 87.0
  • Bit_score: 175
  • Evalue 9.30e-42
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 87.0
  • Bit_score: 175
  • Evalue 4.60e-41
DNA-directed RNA polymerase subunit omega n=4 Tax=Pseudomonas RepID=I2BVI8_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 87.0
  • Bit_score: 175
  • Evalue 3.30e-41

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGGCCCGCGTAACCGTTGAAGACTGCCTAGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCTACCAAGCGTGCCCGTCAACTGGCCACTGGCGGCAAAGAGCCCCTGGTCCAGTGGGAAAACGACAAGCCTACCGTTGTAGCCCTGCGTGAAATCGCTGAAGGCCTGATGAGCTACGAGTTCATCGCCAACGCCGAAATCGTTGAAGACGAACCGCTGTTTGCAGCGTTCGAAGGCGAGTCCAACGAGGACGTCTAA
PROTEIN sequence
Length: 88
MARVTVEDCLEHVDNRFELVMLSTKRARQLATGGKEPLVQWENDKPTVVALREIAEGLMSYEFIANAEIVEDEPLFAAFEGESNEDV*