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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3986_14

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(13286..14998)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion posttranslational regulatory protein TagR n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BTG5_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 570.0
  • Bit_score: 1123
  • Evalue 0.0
TagR protein {ECO:0000313|EMBL:AFJ57548.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 570.0
  • Bit_score: 1123
  • Evalue 0.0
tagR; type VI secretion posttranslational regulatory protein TagR similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 570.0
  • Bit_score: 1123
  • Evalue 0.0
  • rbh

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1713
ATGTATAAATTACTGGGCGCCTGCGTGGCGCTGAGCCTGGCCTCGCTGGCCTGGGCCGATGAGGCAAGTGACAAGCTCGACAACCCCAAGCCGTTGCCGGACGACGTGAGCCTGCCGCTGCCCTGCGAAGGTAACATGGTATTCCGCTACGCCTACATTCTGGCCCAGGGCACCCTGGATGACCGTGAAATCAACCTGGGCTACCCCTTTGCCGAAGGCGAGGCGGGTTATCAGCAGTCGTTTATTTCCGGCTACCGGCGCGACTTCATCAACGGCCAGTTCACCCTCAAGGACTTGCCCAAGGACTGGAGCAAGGTCATCGCGCCGCAGATGCCGAAGACCGACGCCAAGACCCCGCTCAAGCCCATGCTGTACTTTATCGGCAAATACGAAGTGACTGCTCGCCAGTACGCCCAGGTGATGGCCCAGGCGCAATCCCTGGCCAGCGGAGAACCGGCTCCCGCATGTGAGGCGCCCAGCGGCATGGCCGGGCGTTTGCCCAAGGTGAAACTGTCGCGCTTTGAAGCCGAGCGTTTCTCGGCGGTGTACAGCGCCTGGCTGATGAAATACCACCGCGAACTGCTGCCGGTAAGCGGGCGCGGTGCGTCGGCCGAAGACGGCGGCCTGGGTTTTGTGCGCCTGCCCACCGAAGTGGAGTGGGAGTACGCCGCACGCGGCGGCCAGGCGGTGAGCCGCCAGGACCTCGAAGGCCGTCTGTATCCACGGCGCGCCGAGGGCAGTGAAAGCGATGGTCCGCTGGCCGATTACGCGGTGTTCAACCAAGTGGCCGGCGGCACCGGCCAGGCGGCGCGGTTGATGCCCATCGGTACCAAGTTGCCCAACCCCATTGGCATGTTCGACGTGATCGGCAACGCCGCGGAAATGGTCCAGGAATCCTTCCAGCTGGTACACGCTGGCCGCCGCCAGGGCACCTACGGCGGCTTTGTGGTCAAGGGCGGCAACTACCTGGAAGGCGAGGGCACGTTGTTCACCGGCATGCGCCGCGAATACCCGTTGTTTGCCGCTGATGGCACCGAGCAAAGCAACGAGACCACCGGCTTTCGCGTGGCGATTGGCGCGTTGTCGGCGCCGCGCTCGCGCTACAAGGAATTGTTTGCCCAATGGCAGAAGGAAGGCCGCCTGGCCGCGCTGACCGATGCCATCGACGACGCCCAGGACCCGACCAAGCGCCTGGACAGCATCATCGCCGCCAGTGTCGATCCCAAGCTTCAAGCCGAGCTGGGCCTGGTCAACGAAGAGCTCAAGCGCAACGTGTCGCTGATCGCCCAGCAACGCGAAGAAGCCGCGGGCAATTTGATCCAGTCGGCGGCGTTGGTGGCCGAGACCATCAGCAACTACAACATCCGCCTGGCCAACCTGCACAAGAGTCGCCAGCAGGCGGTGGACAGCAAGGACGAGGCCAGCGCGCAGCTGTTTGACATGGCCATTACCAATGGACGCAGCGCGTTGGACGGCGCGGTGGCGATTTACATCGACAACCTGGCCACCGGCACGCGCTACACCGATGCGGTGATCCAGGCGCAGTTTCAACGGATCAAGGAAGAGTTGGATCGCAAGCCAGTGCTCGGCAAGAGCCTGGTGACGCGCGCGACACTGTTCGTTCGCCATGTCGGCAACTACCGCAAGCAACAGCGGGCCGACCCGGCAACGATCTTGAAGGAATTGCTCGCAGCGAGCGGTCAGCGGTCTTGA
PROTEIN sequence
Length: 571
MYKLLGACVALSLASLAWADEASDKLDNPKPLPDDVSLPLPCEGNMVFRYAYILAQGTLDDREINLGYPFAEGEAGYQQSFISGYRRDFINGQFTLKDLPKDWSKVIAPQMPKTDAKTPLKPMLYFIGKYEVTARQYAQVMAQAQSLASGEPAPACEAPSGMAGRLPKVKLSRFEAERFSAVYSAWLMKYHRELLPVSGRGASAEDGGLGFVRLPTEVEWEYAARGGQAVSRQDLEGRLYPRRAEGSESDGPLADYAVFNQVAGGTGQAARLMPIGTKLPNPIGMFDVIGNAAEMVQESFQLVHAGRRQGTYGGFVVKGGNYLEGEGTLFTGMRREYPLFAADGTEQSNETTGFRVAIGALSAPRSRYKELFAQWQKEGRLAALTDAIDDAQDPTKRLDSIIAASVDPKLQAELGLVNEELKRNVSLIAQQREEAAGNLIQSAALVAETISNYNIRLANLHKSRQQAVDSKDEASAQLFDMAITNGRSALDGAVAIYIDNLATGTRYTDAVIQAQFQRIKEELDRKPVLGKSLVTRATLFVRHVGNYRKQQRADPATILKELLAASGQRS*