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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3986_15

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(14991..16175)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transporter membrane protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KGA5_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 394.0
  • Bit_score: 750
  • Evalue 1.10e-213
tagS; Lol-like lipoprotein-translocating system, transmembrane protein TagS Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 394.0
  • Bit_score: 750
  • Evalue 1.60e-213
tagS; Lol-like lipoprotein-translocating system, transmembrane protein TagS similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 394.0
  • Bit_score: 747
  • Evalue 2.00e-213

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
ATGCGCATCGGCCTGGTTGCTTCGCTTGCGTGGCAGGACTACCGCAACGATGGGTGGTTGTCGGCCTGTGCGGTGTTGGCATTGGTGGCGGTTATCGCGCCATTGCTGGTGTTATTCGGGCTGAAATTTGGACTGGTTAGCAGTTTGACCGAACGCTTGGAGACCGACCCCGCCAGCCGTGAAATCATCCCATTGGGCGGTGGTCGATTCAGCGCGGCGTTTATCGCGCAACTGGGTGAGCGCAGCGAGGTGGCGTTTGCTGTGCCGCGCACACGGCAAATTGCCGCCACGGCGCAGGTGGGCACCCTGACCCTGGAAATGCTGCCGACTGCCGCAGGCGACCCGTTGTTGGCAGGCTTGCCGATGCCCCACGGCCTGGACCAGATCGTGCTCAGCCATACCGCCGCCGAAAAGCTCGCGGCAAGGCCCGGTGACTGGCTGGAAACCAGCTTTGCGCGGCAAGTGGCGGGGCGCGTCGAGGCCCAGCGCACGCGGTTGCAGGTGCTGGCGGTGTTGCCGCTGGAGGCCTTCGTTCGCGAGGGCCTGTTTGCCGATCTGGCGTTGTTGGAGGCAGCGGAAGATTATCGCGATGGCCGTGCGGTGCCGGCGTTGGGTTGGGCCGGTGAAGCGGCGAGCGTGAGCGAACAGCGTATCTACCCGGCGTTTCGCCTGTACGCGCGCAGCCTCAGTGATGTGGAACCGTTGCGGGTGTATTTCGCCGGGCAGAACCTGTTGGTTTCAACCCAGGCGCACACCATCGCTCAAGTGCAATCGTTGAGCCGCAACCTGTCGATTGTGTTCTGGATCATCGCCGGGTTGGCGCTGGCCGGGGCGTTTGCGGCTATTTTCGCGGGCACCCTGGCGGCGGTAGCGCGTAAGCACCGTGAACTCTCGGTGTTGCGCCTGCTGGGGTTTTCCACCGCCGCCTTGTTGCTGTTTGTGCTGCTGCAAGCGCTATACAGCGCGGGTTTTGCCGCTGTGCTCAGCGTTGGGCTGTATGGCCTGGCTGAGGCGGCGTTGAACAAGCTTTTTGTGCAGGTGCCGGGCGAGTACGCCAGCCACCTGTTGGCGCGCCATTATGGCCTGGCCCTGGTGGCGGTGCTCGGTGTCAGTGCCGTGGCGGCCGCCTGTGGTGGTTGGCGGGTGGCACGTATCCAGGCTTCTGAAGGAATCAGAGATGTATAA
PROTEIN sequence
Length: 395
MRIGLVASLAWQDYRNDGWLSACAVLALVAVIAPLLVLFGLKFGLVSSLTERLETDPASREIIPLGGGRFSAAFIAQLGERSEVAFAVPRTRQIAATAQVGTLTLEMLPTAAGDPLLAGLPMPHGLDQIVLSHTAAEKLAARPGDWLETSFARQVAGRVEAQRTRLQVLAVLPLEAFVREGLFADLALLEAAEDYRDGRAVPALGWAGEAASVSEQRIYPAFRLYARSLSDVEPLRVYFAGQNLLVSTQAHTIAQVQSLSRNLSIVFWIIAGLALAGAFAAIFAGTLAAVARKHRELSVLRLLGFSTAALLLFVLLQALYSAGFAAVLSVGLYGLAEAALNKLFVQVPGEYASHLLARHYGLALVAVLGVSAVAAACGGWRVARIQASEGIRDV*