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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3986_23

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(27370..27879)

Top 3 Functional Annotations

Value Algorithm Source
Putative lipoprotein n=2 Tax=Pseudomonas RepID=S6H3P8_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 169.0
  • Bit_score: 325
  • Evalue 3.80e-86
tssJ1; type VI secretion lipoprotein TssJ1 Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 169.0
  • Bit_score: 325
  • Evalue 5.30e-86
tssJ1; type VI secretion lipoprotein TssJ1 similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 169.0
  • Bit_score: 322
  • Evalue 5.30e-86

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGATTCCCAGGTTTTTACTCGCAGCCGCCACCGCGCTGCTGCTGACGGCGTGTGCCAACGACACTGCCAAACCCCAGGCGGCTGCCGCGGCCGAAGCTGACACGGCCGCCGTTGAGCTGCATTTTCATGCGATTGCCGGGCTTAACCCCGGTGCCAACGGCCAGGCCGCGCCAGTGCGGGTGCGCATTTTCGAATTGAAAAACGCCGCGACCTTTTCACGCTCCGATTACTTCGCCCTGGCGGACCGTGCGCAATCGACCCTCGGCCTCGACCTGCTGGACCAGGACGAAGTGATGGTGCAGCCCGGCCAACAACTGAGCCTGCAGCGCGATCTCGACCCGTCCACGCGCCAGATCGGCTTGCTGGTGGGCTACCGCGAGTTGGACCGTGCGCAATGGCGCACGGTCATCAACGTGCCGCCGCGCCAATACAGCGAATACCAGATCAGCCTCGACGTGCATGCCGTGCGCGCCGACGTCGTGGCTTCCCCATCCAGCCCAGCCCAATAA
PROTEIN sequence
Length: 170
MIPRFLLAAATALLLTACANDTAKPQAAAAAEADTAAVELHFHAIAGLNPGANGQAAPVRVRIFELKNAATFSRSDYFALADRAQSTLGLDLLDQDEVMVQPGQQLSLQRDLDPSTRQIGLLVGYRELDRAQWRTVINVPPRQYSEYQISLDVHAVRADVVASPSSPAQ*