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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3986_25

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 29659..30678

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=2 Tax=Pseudomonas RepID=S6ID01_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 339.0
  • Bit_score: 661
  • Evalue 5.90e-187
tssA1; type VI secretion protein TssA1 Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 339.0
  • Bit_score: 660
  • Evalue 1.10e-186
tssA1; type VI secretion protein TssA1 similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 339.0
  • Bit_score: 658
  • Evalue 1.40e-186
  • rbh

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
GTGGATGTGCCGTTGCTGCTCACCGCCGTTTCCGCGACGTCGCCCTGTGGCGAGGACATGGAATATGACGCGCAATTTCTGCAATTGGAACGTGATGCCAAGGGCCAACCCGAACGCAGCATGGGCGACTCGATCCTGCCCGCTGAGCCGCCCGAGTGGCGCAGCATCCAGCAGCAAAGCCTCGACCTGTTGCAGCGCAGCAAAGACCTGCGCATCACCCACTTTCTGCTGCAAAGCACCCTCGCCCTCCAGGGTGTGGCCGGGCTGGCCGAAGTCCTCACGCTGATCGACGCCTTGCTGCGCCAATACTGGGCCGATCTGCACCCGCGCCTGGATGCCGACGATGACAACGACCCCACCGTGCGCATCAACGCCCTTACCGGCCTGACCTGCGAGACCAATATTCGTCTGCTGCGCGAAAGCATCCTGACGCGCTCGCGCACCTTCGGGCCCGTGACCCTGCGCGCAGCGCTCAACGCCAGCGGCCTGCAGAGTTTTGCCGATGAGCAGTTGGGCAACCAGCAACTCAACGCCGCGTTCCTGGACAGCGACCCCGAACAACTGCAAGCCACCCGTGACGCCTTGAGCGCGGCGCGTGCGGCGTGCGAGGCCATTGAGCAACAGGTCAATGACCAAGTCGGTTCCGCCCAGGGCGTGGACCTCAGCGCCTTGAAGCAGCCGCTCAAACAGGCCCTGCAACTACTCAACCAAGCGGTGCCAGGCACCGACAGCAGCAGCGATCCCGAGGCCGTCAGTGAAGACAATGCCCCCTCGGTCGATAACGCCGCCGCGCCCGCAGCTCCTCGCCCTTCTGGCGACATCGCCACCCGCGACGATGTGCTGCGCAGCCTCGACAAGATCCTTGCGTACTACACCCGCCACGAGCCTTCGAGCCCGCTGCCGGTGCTGTTGAACCGAGCCAAGAATCTGGTACATGCCGACTTTGCGGCCATCGTGCGCAATCTGATTCCCGATGGCATGTCCCAATTTGAAAACCTGCGCGGCCCCGAAAGCGAGTAA
PROTEIN sequence
Length: 340
VDVPLLLTAVSATSPCGEDMEYDAQFLQLERDAKGQPERSMGDSILPAEPPEWRSIQQQSLDLLQRSKDLRITHFLLQSTLALQGVAGLAEVLTLIDALLRQYWADLHPRLDADDDNDPTVRINALTGLTCETNIRLLRESILTRSRTFGPVTLRAALNASGLQSFADEQLGNQQLNAAFLDSDPEQLQATRDALSAARAACEAIEQQVNDQVGSAQGVDLSALKQPLKQALQLLNQAVPGTDSSSDPEAVSEDNAPSVDNAAAPAAPRPSGDIATRDDVLRSLDKILAYYTRHEPSSPLPVLLNRAKNLVHADFAAIVRNLIPDGMSQFENLRGPESE*