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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1379_5

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 4756..5955

Top 3 Functional Annotations

Value Algorithm Source
pcaF; beta-ketoadipyl CoA thiolase (EC:2.3.1.-) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 399.0
  • Bit_score: 774
  • Evalue 7.90e-221
pcaF; beta-ketoadipyl CoA thiolase (EC:2.3.1.-) similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 399.0
  • Bit_score: 773
  • Evalue 3.50e-221
Beta-ketoadipyl CoA thiolase n=2 Tax=Pseudomonas RepID=I2BTI9_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 399.0
  • Bit_score: 773
  • Evalue 1.20e-220

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGCGCGAGGTATTTATCTGCGATGCCATTCGCACGCCGATTGGCCGTTTCGGCGGTGGCCTGTCTACGGTGCGCGCCGATGACTTGGCGGCACTGCCGATCAAGGCGCTGATCGAGCGTAACCCGTCGGTGGACTGGAGCGCCGTAGACGAAGTCTTCCTCGGCTGCGCCAACCAGGCCGGTGAAGATAACCGCAACGTGGCACGCATGGCGTTGCTGCTGGCGGGGCTGCCGGAAAGTATTCCTGGAGTGACCCTCAACCGCCTGTGCGCCTCGGGCATGGATGCCATCGGCACCGCTTTTCGTGCGATTGCCAGTGGTGAAATGGAGTTGGCGATTGCCGGTGGCGTCGAATCGATGTCCCGCGCTCCGTTTGTGATGGGCAAGGCCGACGCGGCGTTCTCGCGCAACATGAAGTTGGAAGACACCACCATTGGCTGGCGCTTTATCAACCCGCTGATGAAGGCCCAGTACGGTGTGGATGCCATGCCGCAGACCGCCGATAACGTGGCCGATGACTATCAGGTTTCCCGCGCCGACCAGGACGCTTTCGCCCTGCGCAGCCAGCAACGCACCGCCGCTGCCCAGGCCGCCGGGTTCTTTGCCGAGGAAATCGTTCCGGTGCGGGTCGCCCATAAAAAAGGCGAAACCCTGGTGGAACACGATGAACACCCACGGGACACCACGTTGGAAGCCCTGGCCAAGCTCAAGCCGGTCAACGGCGCGGACAAGACCGTCACTGCCGGCAATGCCTCGGGCGTCAACGACGGCGCCGCCGCGCTGATCCTCGCCAGCGCCGAGGCCGTCAAGCAACACGGCCTCACCGCCCGCGCCCGTGTGCTGGGCATGGCCAGTGCCGGAGTCGCCCCGCGGGTGATGGGCATCGGCCCGGTGCCGGCGGTGCGCAAACTGGTGGAGCGCCTGGGGTTGGCGGTCACCGACTTTGATGTGATCGAACTCAACGAAGCCTTCGCCAGCCAAGGCCTGGCGGTGCTGCGCGAGCTGGGTATCGCTGACGATGCGCCCCAGGTCAACCCCAACGGCGGCGCCATTGCCCTCGGTCACCCCTTGGGGATGAGTGGTGCGCGGTTGGTGATGACGGCCCTGCACCAATTGGAAAAAACCGGCGGCCGCAAAGGCCTGGCGACCATGTGCGTGGGCGTCGGCCAAGGCCTGGCCCTGGCGATTGAACGCGTCTGA
PROTEIN sequence
Length: 400
MREVFICDAIRTPIGRFGGGLSTVRADDLAALPIKALIERNPSVDWSAVDEVFLGCANQAGEDNRNVARMALLLAGLPESIPGVTLNRLCASGMDAIGTAFRAIASGEMELAIAGGVESMSRAPFVMGKADAAFSRNMKLEDTTIGWRFINPLMKAQYGVDAMPQTADNVADDYQVSRADQDAFALRSQQRTAAAQAAGFFAEEIVPVRVAHKKGETLVEHDEHPRDTTLEALAKLKPVNGADKTVTAGNASGVNDGAAALILASAEAVKQHGLTARARVLGMASAGVAPRVMGIGPVPAVRKLVERLGLAVTDFDVIELNEAFASQGLAVLRELGIADDAPQVNPNGGAIALGHPLGMSGARLVMTALHQLEKTGGRKGLATMCVGVGQGLALAIERV*