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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1379_11

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 10922..11320

Top 3 Functional Annotations

Value Algorithm Source
pcaC; 4-carboxymuconolactone decarboxylase (EC:4.1.1.44) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 132.0
  • Bit_score: 266
  • Evalue 2.30e-68
pcaC; 4-carboxymuconolactone decarboxylase (EC:4.1.1.44) similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 132.0
  • Bit_score: 263
  • Evalue 3.90e-68
4-carboxymuconolactone decarboxylase n=3 Tax=Pseudomonas RepID=I4K3Y7_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 132.0
  • Bit_score: 266
  • Evalue 1.30e-68

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 399
GTGGACGAGAAACAACGTTACGCCGAGGGCCTGCAGGTGCGCCGCGAAGTACTGGGCGATGCCCATGTCGACCGCAGCCTCAATGCCCTGACCGAGTTCAACAGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGTGACATCTGGACCCGTCCCGGCCTGCCTCGGCATACCCGCAGCCTGATCACCATCGCGATGCTGATCGGCATGAACCGCAGTGAAGAACTGAAGCTGCACCTGCGTGCCGCCGCCAGCAACGGCGTAACCCGCGCCGAGATCAAGGAAGTGCTGATGCAGAGTGCGATCTACTGCGGGATTCCGGCAGCGAATGCGACGTTTCATTTGGCTGAGTCAGTGTGGGATGAGTTGGGTGTGGAGTCTCGCCAACAAGACTGA
PROTEIN sequence
Length: 133
VDEKQRYAEGLQVRREVLGDAHVDRSLNALTEFNSEFQEMITRHAWGDIWTRPGLPRHTRSLITIAMLIGMNRSEELKLHLRAAASNGVTRAEIKEVLMQSAIYCGIPAANATFHLAESVWDELGVESRQQD*