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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1379_17

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 19895..20527

Top 3 Functional Annotations

Value Algorithm Source
Putative TetR family regulatory protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J9G0_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 210.0
  • Bit_score: 426
  • Evalue 1.50e-116
emhR; transcriptional regulator EmhR Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 210.0
  • Bit_score: 426
  • Evalue 2.10e-116
Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 210.0
  • Bit_score: 421
  • Evalue 1.80e-115

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGGTTCGTCGCACCAAAGAGGAAGCTCAGGAAACGCGCAGCCAGATTCTCCAAGCCGCCGAGCAAGCCTTTTATGAGCGTGGCGTGGCGCGCACCACCCTGGCGGACATCGCCGCGCTGGCAGGGGTGACGCGCGGGGCTATCTATTGGCATTTCAGCAATAAGTCCGATTTGCTCCAGGCCCTGCTCGACACGCTGCACGAACCGCTGGACGAACTGGCCCGGGCGAGTGAAAGCGAGGATGAAGCCGACCCGCTCGGCTGTATGCGCAAGCTGCTGATTCATCTCTACCATGAAGTGGCCCTGGACCCGAAAACCCGGCGCATCAACGAGATTCTGTTTCATAAGTGCGAGTTCACCGATGAAATGTGCGACATGCGCCGCCAACGCCAGACCCACACCCTTGAGTGCAACCTGCGCATCGGCTTGACGTTGCGTAACGCGGTCCATCGCGGGCAACTTCCAGCCACGCTGGATACCACCCGTGGGGCCGTGTGTATTCATGCGTTTATCCACGGGTTGATCGGCCAGTGGCTGCTGGTGCCTGACAGTTTTCAATTGCATCAGGACGCCGAGCGCTGGGCGGATATAGGGCTGGACATGCTGCGCCTGAGCCCCAGCCTGCGCAATTGA
PROTEIN sequence
Length: 211
MVRRTKEEAQETRSQILQAAEQAFYERGVARTTLADIAALAGVTRGAIYWHFSNKSDLLQALLDTLHEPLDELARASESEDEADPLGCMRKLLIHLYHEVALDPKTRRINEILFHKCEFTDEMCDMRRQRQTHTLECNLRIGLTLRNAVHRGQLPATLDTTRGAVCIHAFIHGLIGQWLLVPDSFQLHQDAERWADIGLDMLRLSPSLRN*