ggKbase home page

RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_18

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(18487..18969)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily, FpvI n=3 Tax=Pseudomonas RepID=I2BVU4_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 160.0
  • Bit_score: 324
  • Evalue 8.10e-86
fpvI; RNA polymerase sigma-70 factor, ECF subfamily, FpvI similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 160.0
  • Bit_score: 324
  • Evalue 2.30e-86
fpvI; RNA polymerase sigma-70 factor, ECF subfamily, FpvI Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 160.0
  • Bit_score: 324
  • Evalue 1.10e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGTTGGAAAACTACTATCGCGAGCTGGTGTGTTTCCTGAACGCCAAGCTGGGTAACCGCCAGGTGGCCGAAGATGTGGTGCATGACGCCTATGTGCGGGTGCTGGAGCGCGTAAGCGATACGCCAATCGAGCAGCCTCGCGCGTTTCTTTACCGCACGGCACTGAACCTGGTGATCGACGGCCATCGGCGTAATGCCTTGCGTCAGTCCGAGCCTCTTGAGGTGCTGGACAGCGAAGAGCGCTTCGCCGCCTGTTCCCCCCACACCAGCCACCACCAGGGCCAGCGCCTGGAGATGCTCGAGCGCGCCTTGGCCGAGTTGCCGGCGGCCTGTCGCGACAGTTTCCTGTTGCGCAAACTCGAAGGCCTGTCCCACGTGCAAATCGCCGAACGCCTGTGCATTTCCCGCAGCCTGGTGGAAAAACACATCGTCAATGCGATGAAGCACTGCCGGGTGCGCATGCGCGAGTGGGAAGCGCACTGA
PROTEIN sequence
Length: 161
MLENYYRELVCFLNAKLGNRQVAEDVVHDAYVRVLERVSDTPIEQPRAFLYRTALNLVIDGHRRNALRQSEPLEVLDSEERFAACSPHTSHHQGQRLEMLERALAELPAACRDSFLLRKLEGLSHVQIAERLCISRSLVEKHIVNAMKHCRVRMREWEAH*