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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_21

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 22446..23858

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, outer membrane factor lipoprotein, NodT family n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BRR6_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 470.0
  • Bit_score: 896
  • Evalue 1.20e-257
NodT family efflux transporter outer membrane lipoprotein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 470.0
  • Bit_score: 901
  • Evalue 5.00e-259
NodT family efflux transporter outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 470.0
  • Bit_score: 894
  • Evalue 9.50e-258

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
GTGAATAAACGATCTCTCACTCCACAACTGTCAGCGCTCAGTGTGTGCCTGTTGCTCACGGCCTGCGGCACTAACCCGCCCGCCATCGACAGTGGCCTTGCTGCGCCCGCCGCCTGGCATTTTGCCGAACGCGAAGCGACCCAAGCCATCAACCAACGTTGGTGGACGCAGTTTGGCAGCCCGGCGCTGAACCGCCTGATCGACCAGGCCCGCCGTGACAGCTTCGACGTGGCGGCGGCCATGGCGCGTGTCCGCCAGGCCCAGGCCACGGCGGTAATTGCCGGTGCACCGTTGTTGCCGGAACTGAAGTTCAACCTCAGCGCCAGCCGTCAACGGCTGTTGCGCGGCAGCGGCAACTCGGAGCTGGACGCCACCGAGAGCGACAGGACTGTCAACAACTATGACGCCAACCTCACGGCCAGCTACGAAATCGACTTCTGGGGTGGCCGCGCCGCTGCCCGCGACAGCGCCGTGCACAGCTTGCACGCCAGTGAGTTCGATCAGGCCAATGTGGAGCTGACCCTGCTCAGCAACGTCGCCGACCGCTACGCGCAAACCCTGGCCGCACGCCAGCGCCTGCAGATTGCCGAGCTCAACCTGGCGAATGCGCGCAATGTGCTGAACCTGGTGCAGACCCGCCACGACGCAGGTTCCGCCACGGCCCTGGAACTGGCACAACAGAAAAGCCTGGTGGCCGGTCAGCAACGGCAACTGCCGCTGATCGAGCAATCGGCCGAAGAATCGCAGATCACCCTCGCCGCCTTGCTCGGCCAACCCGTGCAGGCCCTGGAGCTAGGCACAGAACCCTTTCAGGCATTGACCTGGCCAAGTATCGGGCCTGGCGTGCCCAGCCAGTTATTGAGCCGGCGCCCCGACCTCGCCCAGGCCGAGGCCCAGTTGGCGGCGGCCAGCGCCGACGTCACGGTGGCCCGTGCGGCCATGCTACCGACGGTGACGTTGGGCGCAACGCTCGGCTCAGGCGCGTCCAAGGCTGAAGAGATCCTGCGCAGTCCCTTCTACACCCTGACCTCGGGCCTGATGGCGCCGATTTTCAATAATGGCCGGCTGAGCGCCGAGCGCGACAAGGCTCGGGCACGCCAGGATGAACTGCTGCAAACCTACCGTGGGGCGATCATCAACGGCTTTGCCGATGTGGAAAAAGCCCTCAGCAGCATCACCCGCCTGGACCAGCAACGCCAGTGGCAAACCGAAGAGCTGCAACAGGCGCAGGCCGCCTTCCAGATTGCCCAAAGCCGCTATGAAGCCGGCGCCGAAGACCTGCTCACGGTACTGCAAACCCAGCGCACCCTGTACGACGCCCAAGACCAGAACGTGCTACTGCGCCTGTCGCGCCTGCAAGCCAGCATCGCCCTGTACAAGGCATTGGGCGGTGGCTGGAACACCGATATCTGA
PROTEIN sequence
Length: 471
VNKRSLTPQLSALSVCLLLTACGTNPPAIDSGLAAPAAWHFAEREATQAINQRWWTQFGSPALNRLIDQARRDSFDVAAAMARVRQAQATAVIAGAPLLPELKFNLSASRQRLLRGSGNSELDATESDRTVNNYDANLTASYEIDFWGGRAAARDSAVHSLHASEFDQANVELTLLSNVADRYAQTLAARQRLQIAELNLANARNVLNLVQTRHDAGSATALELAQQKSLVAGQQRQLPLIEQSAEESQITLAALLGQPVQALELGTEPFQALTWPSIGPGVPSQLLSRRPDLAQAEAQLAAASADVTVARAAMLPTVTLGATLGSGASKAEEILRSPFYTLTSGLMAPIFNNGRLSAERDKARARQDELLQTYRGAIINGFADVEKALSSITRLDQQRQWQTEELQQAQAAFQIAQSRYEAGAEDLLTVLQTQRTLYDAQDQNVLLRLSRLQASIALYKALGGGWNTDI*