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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1977_25

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 27383..28381

Top 3 Functional Annotations

Value Algorithm Source
rsmC; ribosomal RNA small subunit methyltransferase C (EC:2.1.1.172) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 332.0
  • Bit_score: 665
  • Evalue 4.30e-188
rsmC; ribosomal RNA small subunit methyltransferase C (EC:2.1.1.172) similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 332.0
  • Bit_score: 663
  • Evalue 3.30e-188
Ribosomal RNA small subunit methyltransferase C n=2 Tax=Pseudomonas RepID=I2BRZ4_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 332.0
  • Bit_score: 663
  • Evalue 1.20e-187

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGGATCCGCGCAGTGAAGTACTGCTTCGCCAGGCCGAACTTTTTCAAGGCAACCTGCTGCTCGTAGGTTTGCCTGCCGACGATTTGCTTGGGCGCCTGCCCAATGCCCACGGCTGGTGCTGGCATGCCGGTGACCAAGCGGCGCTCGATGCGCGCTTCGCAGAGCGCAGCCAGTTTGGCGTGACGGTGCCAGAGCGCGCCTTTGATGCGGCGGTGATTTTCCTGCCCAAGTCCAAAGACCTCACCGACTACCTGCTCAACGCCGTGGCCGCGCGCCTGCCTGGCGCTGAGCTGTTTCTGGTGGGCGAGAAAAAGGGGGGTATCGAAAGCGCCGCCAAACAGATGGTTCCGTTCGGCAAACCGCGCAAGCTCGATAGTGCACGGCATTGCCAGCTGTGGCAGGTCACCGTCGCCAACGCGCCGCACGCCGTGGAGCTTGAGAGCCTGGCACAGGTCTTCGACGTACCGCTGGCCGAAGGCCCGCTGAAGGTGGTGAGCTTGCCAGGGGTGTTCAGCCATGGTCGCCTGGACCGCGGCACCGAGTTGTTGCTGGAGCACTTGGACAAGCTGCCCAGCGGCAACCTGCTCGATTTCGGTTGCGGCGCCGGGGTGTTGGGGGCTGCGGTCAAACGCCGCTACCCGCATAACACCGTGACGATGCTGGATGTGGATGCCTTCGCCGCCGCCAGCAGTCGCCTGACGCTGGCAGCGAACGGCCTGGAAGCTGATGTGTTGACCGGTGACGGTATCGACGCCGCGCCCATGGGTTTGAATGCGATTTTGAGCAATCCGCCGTTCCATGTCGGCGTGCACACCGATTATTTCGCCACGGAGAACCTGCTGCGAAAAGCGGCGAAACACCTGACAAAAGGTGGCGAACTTCGCTTGGTCGCCAATAGTTTCCTGAAGTACCAGCCACTGATCGAAGAGCATTTGGGCATCTGCGCAATCAAGGCCGAAGGCAATGGTTTTCGCATTTACCGCGCCAAGCGTCCCTGA
PROTEIN sequence
Length: 333
MDPRSEVLLRQAELFQGNLLLVGLPADDLLGRLPNAHGWCWHAGDQAALDARFAERSQFGVTVPERAFDAAVIFLPKSKDLTDYLLNAVAARLPGAELFLVGEKKGGIESAAKQMVPFGKPRKLDSARHCQLWQVTVANAPHAVELESLAQVFDVPLAEGPLKVVSLPGVFSHGRLDRGTELLLEHLDKLPSGNLLDFGCGAGVLGAAVKRRYPHNTVTMLDVDAFAAASSRLTLAANGLEADVLTGDGIDAAPMGLNAILSNPPFHVGVHTDYFATENLLRKAAKHLTKGGELRLVANSFLKYQPLIEEHLGICAIKAEGNGFRIYRAKRP*