ggKbase home page

RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1970_2

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(2188..3990)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transporter ATP-binding protein n=2 Tax=Pseudomonas RepID=S6H4H8_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 600.0
  • Bit_score: 1164
  • Evalue 0.0
ABC transporter permease Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 600.0
  • Bit_score: 1164
  • Evalue 0.0
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 600.0
  • Bit_score: 1162
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1803
GTGTATGAACAGCCTCCACGCACCGACCGCCTGACCTGGGCGGAAATTCGCCGCCTGGCCCTGCGTCACAAAAAATCCCTGTGGGTCGCCAACGGTGTCGCCGTGCTCGCCACCCTGTGCAGCGTGCCTATCCCGCTGTTGTTGCCGTTGCTGGTCGACGAAGTGCTACTGGGCCATGGCGATGCCGCCCTCAAGGTGATGAACCACGCGTTGCCCCTGGGCTGGCAAAAAGCGGCTGGCTATATCGGCCTGATGCTCTTGGTCACCCTGGCCCTGCGTTGCGGCGCGTTGGTGTTCAACGTGGTGCAGGCGCGGCTGTTTGCGCGCTTGGCCAAGGACATCGTGTACCGCATCCGCGTGCGCCTGATCGAGCGTCTCAAGCGCATCTCCCTGGGTGAGTACGAAAGCCTGGGCAGCGGTACGGTCACCACCCACTTGGTGACCGACCTGGACACCCTGGACAAATTCGTCGGCGAAACCCTCAGCCGCTTCCTGGTGGCGATGCTGACCCTGGTCGGCACCTCGGCGATCCTGGTGTGGATGCATTGGCAACTGGCGTTGTTGATCCTGTTGTTCAACCCATTGGTGATCTACGCCACGGTGCAGTTGGGCAAGCGCGTCAAGCACCTCAAGAAGCTGGAAAACGACAGCACCTCACGCTTTACCCAGGCGCTGACTGAAACCCTGGATGCCATCCAGGAAGTGCGCGCCGGTAACCGCCAGGGCTTTTTCCTCGGGCGCCTGGGCCAGCGTGCCCAGGAAGTGCGTGACTACGCCATTCATTCCCAGTGGAAAACCGACGCGTCGAGCCGCGCCAGTGGCTTGCTGTTCCAGTTCGGTATCGACATCTTCCGCGCCGCGGCCATGCTCACCGTGCTGTTTTCCGACCTGTCCATCGGCCAGATGCTCGCAGTGTTCAGTTACCTGTGGTTCATGATTGGCCCGGTGGAACAACTGCTGAACCTGCAATACGCCTATTACGCGGCGGGCGGCGCGCTGTCGCGCATCAACGAGCTGCTGGCGCGTGCCGATGAGCCGCAATACCCAGGCGGCGCAGACCCGTTCAGCGGGCGCGAGACGGTCGGCATCGAAGTGCGTGGCCTCGACTTCGGCTACGGCGAAGAGCTGGTACTCAACCAGTTGAACCTGGCCATCGCACCGGGTGAAAAGGTGGCAATTGTCGGCGCCAGCGGCGGCGGTAAAAGCACCCTGGTGCAACTGTTGCTGGGGCTCTACACGCCGCAGGCCGGCAGCATTCGTTTTGGCACTGCCACCCAGCAGGAGATTGGCCTGGAGACCATCCGCGAAAACGTCGCGGTGGTGCTGCAACATCCTGCGCTGTTCAACGATACCGTGCGCGCCAACCTGACCATGGGCCGCACCCGCACCGATCAAGCCTGCTGGCAGGCGCTGGAAATCGCCCAACTGGATGCTACTGTCAAGGCATTGCCCTTGGGCCTGGACAGCGTGGTCGGGCGTTCGGGGGTGCGCTTTTCCGGTGGCCAGCGGCAACGCCTGGCCATTGCCCGCATGGTGCTCGCCGAGCCTAAAGTGGTGATTCTGGACGAGGCCACCTCCGCATTGGACGCGGCGACCGAGTACAACCTGCACCAGGCACTGGCGCGGTTTCTCAGCGGGCGTACTACACTCATCATCGCCCACCGGCTGTCTGCGGTGAAGCAGGCTGACCGAGTGCTGGTGTTCGATGGCGGGCACATCGCCGAGGACGGCGACCATCAGCAGTTGATTGCCGATGGCGGGCTGTACGCCAAACTGTACGGACACTTGCAACAAGTGCGTTGA
PROTEIN sequence
Length: 601
VYEQPPRTDRLTWAEIRRLALRHKKSLWVANGVAVLATLCSVPIPLLLPLLVDEVLLGHGDAALKVMNHALPLGWQKAAGYIGLMLLVTLALRCGALVFNVVQARLFARLAKDIVYRIRVRLIERLKRISLGEYESLGSGTVTTHLVTDLDTLDKFVGETLSRFLVAMLTLVGTSAILVWMHWQLALLILLFNPLVIYATVQLGKRVKHLKKLENDSTSRFTQALTETLDAIQEVRAGNRQGFFLGRLGQRAQEVRDYAIHSQWKTDASSRASGLLFQFGIDIFRAAAMLTVLFSDLSIGQMLAVFSYLWFMIGPVEQLLNLQYAYYAAGGALSRINELLARADEPQYPGGADPFSGRETVGIEVRGLDFGYGEELVLNQLNLAIAPGEKVAIVGASGGGKSTLVQLLLGLYTPQAGSIRFGTATQQEIGLETIRENVAVVLQHPALFNDTVRANLTMGRTRTDQACWQALEIAQLDATVKALPLGLDSVVGRSGVRFSGGQRQRLAIARMVLAEPKVVILDEATSALDAATEYNLHQALARFLSGRTTLIIAHRLSAVKQADRVLVFDGGHIAEDGDHQQLIADGGLYAKLYGHLQQVR*