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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1970_11

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 12179..14179

Top 3 Functional Annotations

Value Algorithm Source
mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (EC:2.1.1.61 1.5.-.-) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 666.0
  • Bit_score: 1360
  • Evalue 0.0
mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (EC:2.1.1.61 1.5.-.-) similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 666.0
  • Bit_score: 1341
  • Evalue 0.0
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Pseudomonas sp. CF150 RepID=S6J1X8_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 666.0
  • Bit_score: 1342
  • Evalue 0.0

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2001
ATGAACCCCATCACCCACGCCCAGCTCGACTGGGATGATCAAGGCCGCCCGCATTCGCGGGTATTCGACGACGTGTATTTTTCCGACCAGTCGGGCCTGGAAGAAACCCGCTACGTGTTCCTGGAGCAGAACCGCTTGCAGGAACGCTTCGCCGCCTTGCCAACAGGTGGGCGCCTGGTGATTGGCGAGACCGGCTTCGGCACCGGTTTGAACTTCCTCTGCGCCTGGCAGTTGTTCGAACAGCACGCAGTCGCCGGTGCGCGGCTGCACTTTGTCAGCGTGGAAAAATACCCCCTCAGCCATGCCGACCTGCAACGCGCCCTCGCCCTCTGGCCCGAACTGCAACCCTTGGCCGAGCAACTGCTGACGCAATACATTGCCATCCACCAGGGTTTCCAGCGCCTGGTACTGGACAATGGCCGCGTGACCCTGACCCTGTTGATCGGCGATGCGCTGGAACAGTTGCCGCAACTGGACGCCCAGGTCGATGCATGGTTTCTCGACGGGTTCGCCCCGGCGAAAAACCCCGACATGTGGACCGCTGAGCTGTTCGCCCAACTGGCGCGCCTGGCGGCACCGGGCTCGACCATCAGCACCTTCACCAGCACCGGCTGGGTAAGGCGGCTGATCAATGCCGCCGGGTTCAAGATGAAACGCACGCCGGGCATCGGCCATAAATGGGAGATCCTGCGTGGGGAGTTTGTCGGTTGGCCCGCCGACTTACCCGCGCTGGCCCCACGTAAACCCTGGTTCGCCCGACCACCCGCCATCAAGGATGAACGCCACGCCCTGGTCATCGGCGGTGGCCTGGCCGGTTGCGCGACTGCCGCCAGCCTGGCCGCCCGGGGTTGGCGTGTCAGTCTTCTGGAGCGCCACGCCGGCCTGGCACAGGAAGCTTCGGGCAACCCACAGGGTGTGTTGTACCTCAAGCTTTCGGCCCATGGCACGGCCTTGTCCCAACTGATAGTCAGCGGTTTTGGCCACACCCGACGCCTGCTGGAACATTTGCACCGAGGTGTCGATTGGGACGGCTGTGGCGTGTTGCAACTGGCGTTTGACGCCAAAGAGATCCAGCGTCAGGCTCAATTGGCAAACGCCTTTGCTCCGGACCTGCTGCATCTGCTGGACCGCGAGCAAGCGCAGCAAAAGGCGGGAATCGAACTGGCCCACGGCGGGTTGTTTTTTCCACAGGGCGGTTGGGTGCATCCGCCCGCGCTGTGCCAGTGGCAGGCCAAACATCCACTGATTGAAGTGCTCACCCACCACGAGGCACTGGAACTGCACCGGCTCGACGACCAATGGCAAGCCCGCGCCGGTGACCGCGTACTGGCCAGCGCCGGTGTCGTGGTGCTCGCCGGGGCTGCGGAGATCAAGCGTTTCCCCTTCAGTGCAGACATACCGCTCAAGCGCATCCGTGGGCAGATCACTCGGCTGGCGCAAACCTGCGCGAGTAAAGCGCTGGCCACGGTGGTCTGTGCCGAAGGCTACGTCGCGCCGGCCCGGCTTGGCGAACACACCTTGGGCGCGAGTTTCGACTTCAACAATCAAGACCTCACGCCCACGCCCGCCGAACACCATGGCAACCTGCAGATGCTGGGTGAGATTTCTACCGACCTGCTGCAACGCCTGGGTGCTGATCGCTTGACACCCGAACAGCTGGAGGGCCGTGCCGCGTTTCGTTGTACCAGCCCTGACTACCTGCCCATCGTTGGGCCACTGGCTGACCATGCGGCGTTTGAGCAGGCTTATGCGGTACTGGGCAAAGACGCCCGGCAAGTGCCGCAAACGCCCTGCCCGTGGCTGCCGGGGCTGTTTCTCAATAGCGGCCATGGCTCGCGTGGCCTGATCACTGCGCCGTTGTGCGGCGAACTGCTGGCTGCATGGCTGAGTGATGAGCCCCTGCCCGTGCCCACCAGCGTGGCCGAGGCTTGCCACCCCAATCGATTTGCCCTGCGCGCGTTGGTGCGAGGCCAGGGCGCTGCACAAAAAAAGCCGGATTAA
PROTEIN sequence
Length: 667
MNPITHAQLDWDDQGRPHSRVFDDVYFSDQSGLEETRYVFLEQNRLQERFAALPTGGRLVIGETGFGTGLNFLCAWQLFEQHAVAGARLHFVSVEKYPLSHADLQRALALWPELQPLAEQLLTQYIAIHQGFQRLVLDNGRVTLTLLIGDALEQLPQLDAQVDAWFLDGFAPAKNPDMWTAELFAQLARLAAPGSTISTFTSTGWVRRLINAAGFKMKRTPGIGHKWEILRGEFVGWPADLPALAPRKPWFARPPAIKDERHALVIGGGLAGCATAASLAARGWRVSLLERHAGLAQEASGNPQGVLYLKLSAHGTALSQLIVSGFGHTRRLLEHLHRGVDWDGCGVLQLAFDAKEIQRQAQLANAFAPDLLHLLDREQAQQKAGIELAHGGLFFPQGGWVHPPALCQWQAKHPLIEVLTHHEALELHRLDDQWQARAGDRVLASAGVVVLAGAAEIKRFPFSADIPLKRIRGQITRLAQTCASKALATVVCAEGYVAPARLGEHTLGASFDFNNQDLTPTPAEHHGNLQMLGEISTDLLQRLGADRLTPEQLEGRAAFRCTSPDYLPIVGPLADHAAFEQAYAVLGKDARQVPQTPCPWLPGLFLNSGHGSRGLITAPLCGELLAAWLSDEPLPVPTSVAEACHPNRFALRALVRGQGAAQKKPD*