ggKbase home page

RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1083_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 37..1722

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=4 Tax=Pseudomonas RepID=I2BVL1_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 561.0
  • Bit_score: 1090
  • Evalue 0.0
rpsA; 30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 561.0
  • Bit_score: 1090
  • Evalue 0.0
  • rbh
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fl similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 561.0
  • Bit_score: 1090
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1686
ATGAGCGAAAGCTTTGCGGAACTCTTTGAAGAAAGCCTAAAAACCCTGAACCTTCAGGCAGGCTCCATCATCACCGGTGTTATCGTTGATATCGATTACCAAGCTCGCTGGGTAACCGTTCACGCTGGTCTGAAGTCTGAAGCTCTGATCCCGCTGGAACAGTTCTACAACGATGCTGGTGACCTGACTATCAATGTCGGTGACGAAGTTCACGTTGCTCTGGACTCGGTTGAAGACGGTTTCGGTGAAACCAAGCTGTCCCGTGAAAAAGCCAAGCGCGCTGAATGCTGGATTGTTCTCGAAGCAGCCTTCGCAGCTGAAGAAGTGGTCAAGGGCGTTATCAACGGTAAGGTTAAAGGCGGCTTCACTGTCGACGTTAACGGCATCCGTGCGTTCCTGCCAGGTTCTTTGGTCGACGTTCGTCCAGTGCGCGACACCACGCACCTGGAAGGCAAAGAACTGGAATTCAAAGTCATCAAGCTCGACCAGAAGCGCAACAACGTTGTCGTTTCCCGTCGCAGCGTGCTGGAAGCAGAGAACTCCGCCGAGCGTGAAGCTCTGCTGGAATCCCTGCAGGAAGGCCAACAAGTCAAAGGTATCGTCAAGAACCTCACCGATTACGGCGCATTCGTCGATCTGGGTGGCGTCGATGGCCTGCTGCACATTACCGACATGGCTTGGAAGCGTATCAAGCATCCTTCCGAAATCGTCAACGTTGGCGACGAGATCGATGTCAAGGTTCTGAAGTACGATCGTGAGCGTAACCGCGTTTCCCTGGGCTTGAAGCAGCTGGGCGAAGATCCATGGGTTGCTATCAAAGCTCGTTACCCAGAAAGCACCCGCGTAACCGCGCGTGTTACCAACCTGACCGACTACGGCTGCTTCGCAGAGCTGGAAGAAGGCGTGGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAGAACATCCACCCTTCGAAAGTCGTACAAGTCGGCGACGAAGTGGAAGTTATGGTTCTGGACATCGACGAAGAGCGTCGTCGTATCTCCCTGGGCATCAAGCAGTGCAAATCTAACCCATGGGAAGATTTCTCTGGCCAGTTCAACAAGGGCGATAAAATCTCCGGCACCATCAAGTCGATCACCGATTTCGGTATCTTCATTGGTCTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCCGACATCTCCTGGAACGAAGTTGGCGAAGAAGCTGTTCGTCGTTTCAAGAAGGGCGACGAGCTGGACACCGTTATCCTGTCGGTTGACCCAGAGCGCGAGCGCATCTCCCTGGGTATCAAGCAACTGGAAAGCGATCCGTTCTCCGAGTACGTTCAAGAGAACGACAAAGGCGCCATCGTTAAAGGCACTGTGAAAGAAGTTGACGCCAAAGGCGCCATCATCGTTCTGGCCGACGATATCGAAGCGACTCTGAAAGCCTCCGAAATCAGCCGTGACCGCGTTGAAGACGCGCGCAACGTACTGAAAGAAGGCCAGGAAGTAGAAGCCAAGATCATCAGCGTTGACCGCAAGAGCCGCGTGATTCAGCTCTCCATCAAGTCGAAGGACGAAGTGGAAGAGAAAGAAGCTATCCAGAGCCTGAAAGAAGCTGCTCCGGAAGCTGCTGCTGACACCACCATGGCGGCACTGCTGCGCCAGGCAATGGCTAAGCAGAACTAA
PROTEIN sequence
Length: 562
MSESFAELFEESLKTLNLQAGSIITGVIVDIDYQARWVTVHAGLKSEALIPLEQFYNDAGDLTINVGDEVHVALDSVEDGFGETKLSREKAKRAECWIVLEAAFAAEEVVKGVINGKVKGGFTVDVNGIRAFLPGSLVDVRPVRDTTHLEGKELEFKVIKLDQKRNNVVVSRRSVLEAENSAEREALLESLQEGQQVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVNVGDEIDVKVLKYDRERNRVSLGLKQLGEDPWVAIKARYPESTRVTARVTNLTDYGCFAELEEGVEGLVHVSEMDWTNKNIHPSKVVQVGDEVEVMVLDIDEERRRISLGIKQCKSNPWEDFSGQFNKGDKISGTIKSITDFGIFIGLDGGIDGLVHLSDISWNEVGEEAVRRFKKGDELDTVILSVDPERERISLGIKQLESDPFSEYVQENDKGAIVKGTVKEVDAKGAIIVLADDIEATLKASEISRDRVEDARNVLKEGQEVEAKIISVDRKSRVIQLSIKSKDEVEEKEAIQSLKEAAPEAAADTTMAALLRQAMAKQN*