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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1083_8

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 7268..8404

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=2 Tax=Pseudomonas RepID=S6HX02_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 378.0
  • Bit_score: 735
  • Evalue 2.70e-209
polysaccharide biosynthesis protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 378.0
  • Bit_score: 735
  • Evalue 3.80e-209
polysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 378.0
  • Bit_score: 733
  • Evalue 2.20e-209

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1137
ATGAGTTTAATTACCATCTTGTCTCTGATTGCGGGGGGAGGAATAACCAATGGCGTCATTAAATATGTAGCTGAATACAAAATCCTGCCACCGAAGATGCTCCATTTTGTATCTGGGGCATTTTCGTATGCATCGTATTTCTCTGTCGCCTTGTTGGTTATCTGCCTATTTTTCTCAGGCCCCCTTGCCAAAGTTATTATGGGGGATGTGAAATATTTTTGGATAATTATCTTAGTTGGTTTTGCCCAATATGGCTTTGCATTAACGAATTTGATAGTTGGCGTAGTTAACGGTTTAAAGGAGACAAGGGTTTTTGCGATCATCCAAATCGTTGGTGGTTTCTTGGCCATTCCCGTTGCCTGGGCACTCATTGCAAAGTTTGGTTGGAATGGTGCAGTTATCGCGCTCTGCGTGATAGTGGTTTCTCCGTTGCTCCCGGGTATAATGGTCTTTTTCAAGTCGAGCTTTAAAGGGCAAGTAAAATTATTGGCTCTGCGTCAGTTGCCAGTAAAGTTGTTGGCACCGTTTTCGCTTATGTTGTTTACCAGTGCGGTTGCTTTTCCGGTAGTCGAGATGGTGGTAAGGAATTATCTCATTACGAGTGAGGGGTATCATCAAGCAGGTCTATGGCAAGGTGCGATAAAGCTCTCAAGTGCCTACCTTGGTTTTTTTAGTATGTTTCTTGGGTATTATTTCATGCCCATGATATCCGAGCAGCATGATAAGAAAGTTATAGCACGGTTAGTGTTTAGATATCTGGCTTTTGTGATGCTGCTGTTTATCCTTGGCGGTACCGTTTTGTATGTTGGGCGATCTTTTTTTCTGGTGCTGGCTTTGTCGTCCGATTTCAAAGAGCTTGAAGAGTTAATCATATATCAATTGGCCGGTGATTTTTTTAGGATATCCGCATATGTGATCGGTTATGTGGCTGTGGCCAAAGCTGCCACGAAGCTCTATGTAGTAGCTGAGTTTTTTCAAAGCATTGTATTTTTAGGAGCAGTGTTCGCTGCATCATTTTTGTATAATGGTGTACAGGGAGTGATGCTCGGATACATGGCTACGTATATAATTTATTTCATCGTTTGTGTTGTGGGTTTCTGGATTTATCTAGGGAAATCAGTTCGGCGTCTTGAATAA
PROTEIN sequence
Length: 379
MSLITILSLIAGGGITNGVIKYVAEYKILPPKMLHFVSGAFSYASYFSVALLVICLFFSGPLAKVIMGDVKYFWIIILVGFAQYGFALTNLIVGVVNGLKETRVFAIIQIVGGFLAIPVAWALIAKFGWNGAVIALCVIVVSPLLPGIMVFFKSSFKGQVKLLALRQLPVKLLAPFSLMLFTSAVAFPVVEMVVRNYLITSEGYHQAGLWQGAIKLSSAYLGFFSMFLGYYFMPMISEQHDKKVIARLVFRYLAFVMLLFILGGTVLYVGRSFFLVLALSSDFKELEELIIYQLAGDFFRISAYVIGYVAVAKAATKLYVVAEFFQSIVFLGAVFAASFLYNGVQGVMLGYMATYIIYFIVCVVGFWIYLGKSVRRLE*