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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_33100_4

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(4004..4312)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein, YhbY family n=6 Tax=Pseudomonas RepID=I4K747_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 102.0
  • Bit_score: 201
  • Evalue 3.90e-49
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 102.0
  • Bit_score: 201
  • Evalue 1.10e-49
RNA-binding protein, YhbY family {ECO:0000313|EMBL:EIK72188.1}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 102.0
  • Bit_score: 201
  • Evalue 5.40e-49

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Taxonomy

Pseudomonas synxantha → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGCCGCTCACTCAAGAGCAGAAGAAACAGTACAAATCCATTGGCCACCATCTGAAACCAGTTCTGATTGTGGCAGACAACGGTTTGACTGAGGGTGTGCTAGCCGAATTCGAGCGCGCACTGAACGATCACGAACTGATCAAGATCAAGGTCAACATCCTTGATCGCGAAGCGCGCCTGGCCGCCGTTGCAGAACTGTGCAAGGTCGGCAAAGCGGACCTGGTTCAGGTCATCGGCAAGATGGCGCTGCTGTATCGCAAGAACTTCAGCGTCAACAAGCAACTGTCGAACGTTCATCGCTTCAAATGA
PROTEIN sequence
Length: 103
MPLTQEQKKQYKSIGHHLKPVLIVADNGLTEGVLAEFERALNDHELIKIKVNILDREARLAAVAELCKVGKADLVQVIGKMALLYRKNFSVNKQLSNVHRFK*