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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_15435_8

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(7611..8015)

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter, DctM subunit n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4K240_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 134.0
  • Bit_score: 259
  • Evalue 2.00e-66
TRAP transporter subunit DctM similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 134.0
  • Bit_score: 259
  • Evalue 5.70e-67
TRAP transporter subunit DctM Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 134.0
  • Bit_score: 259
  • Evalue 2.20e-66

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
ATGACCCTGATGCAGATCCCGGCGAAGATCACCACGCTGTTCCTGACCCTGTCGGACAACCGCTACGTGATCCTGATGTGCATCAACGTCATGCTGTTGTTGCTGGGCACGGTGATGGACATGGCGCCGCTGATTCTGATCCTCACGCCGATCCTGATGCCGGTGATCCTGGGCATCGGCGTCGACCCGGTACACTTCGGCATGATCATGCTGGTGAACCTGGGTATCGGCCTGATTACCCCGCCGGTGGGCGCGGTGCTGTTCGTTGGTGCGGCGGTGGGCAAGACCAGCATCGAGAAAACCGTGAAGGCACTGCTGCCGTTTTATGCGGTGTTGTTCTTGGTGCTGATTGCGGTGACCTACGTTCCGGCGTTGTCGCTGTGGTTACCCCATTTGGTGCTGTAA
PROTEIN sequence
Length: 135
MTLMQIPAKITTLFLTLSDNRYVILMCINVMLLLLGTVMDMAPLILILTPILMPVILGIGVDPVHFGMIMLVNLGIGLITPPVGAVLFVGAAVGKTSIEKTVKALLPFYAVLFLVLIAVTYVPALSLWLPHLVL*