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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1910_2

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 1301..2410

Top 3 Functional Annotations

Value Algorithm Source
algL; alginate lyase (EC:4.2.2.3) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 369.0
  • Bit_score: 759
  • Evalue 4.90e-217
Alginate lyase {ECO:0000256|HAMAP-Rule:MF_00557}; EC=4.2.2.3 {ECO:0000256|HAMAP-Rule:MF_00557};; Poly(beta-D-mannuronate) lyase {ECO:0000256|HAMAP-Rule:MF_00557}; Poly(mana) alginate lyase {ECO:000025 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 369.0
  • Bit_score: 759
  • Evalue 2.40e-216
Alginate lyase n=3 Tax=Pseudomonas RepID=I2BQ59_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 369.0
  • Bit_score: 759
  • Evalue 1.70e-216

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
ATGCAAAAGTTATTGCTCCCTGGCCTGCTGGGCCTGGCCATGTTCGCAGGTTCCGTCAATGCAGCGGCGCCACTGCGTCCACCCCAGGGCTATTTCGCACCGATCGAAGCGTTCAAGACCGGCGATTTCAAGAATGATTGCGACAGCATGCCAACGCCCTACACCGGGCCGTTGCAGTTTCGCAGCAAGTACGAAGGTTCCGACAAGGCCCGTTCGACCCTGAATGTGCAGTCGGAAAAAGCCTTTCGCGACAGCACCGCCGACATCACCAAGCTGGAAAAAGACACCAGCAAACGGGTGATGCAGTTCATGCGCGACGGCCGTCCACAGCAGCTCGAATGCACCCTGAACTGGCTGGTGTCATGGGCCAAGGCCGATGCGTTGATGTCCAAGGACTTCAATCACACCGGCAAGTCCATGCGCAAATGGGCGCTGGGCAGCATGGCCTCGGCCTATGTGCGCCTGAAGTTCTCCGAGTCGCAGCCACTGGCCAAGCACCCGCAGGAAGCCCAGCAGATCGAAGCCTGGTTCAACAAGCTGGCCGACCAGGTGGTGAGCGACTGGGACAACCTGCCCCTGGAAAAAACTAACAACCACTCGTACTGGGCCGCCTGGTCGGTGATGGCAACGTCCATCGCTACCAACCGCCGCGACCTGTTTGACTGGGCGGTGAAGGAATACAAGGTCGGCGTGAACCAGGTCGATGACCAGGGTTTCCTGCCGAACGAATTGAAGCGCCAGCAACGCGCCCTGTCGTACCACAACTACGCGCTGCCGCCGCTGTCGATGATCGCCAGTTTTGCGCTGGTCAACGGCGTGGACCTGCGCCAGGAAAACAACAGCGCGCTCAAGCGCCTGGGCGACAAGGTGCTGGCCGGGGTGAAAGACCCGGACATCTTCGAGCAGAAGAACGGCAAAGAGCAGGACATGAAGGACCTCAAGGAAGACATGAAATTTGCCTGGCTTGAGCCCTTCTGCACCCTCTACACCTGCGCCCCGGATGTGATCGAACGCAAGCATGGCATGCAACCGTTCAAGACCTTCCGCCTGGGCGGTGACCTGACCAAGGTCTACGACCCGGCGCATGAAAAAGGCAACAAAGGCAGCTAG
PROTEIN sequence
Length: 370
MQKLLLPGLLGLAMFAGSVNAAAPLRPPQGYFAPIEAFKTGDFKNDCDSMPTPYTGPLQFRSKYEGSDKARSTLNVQSEKAFRDSTADITKLEKDTSKRVMQFMRDGRPQQLECTLNWLVSWAKADALMSKDFNHTGKSMRKWALGSMASAYVRLKFSESQPLAKHPQEAQQIEAWFNKLADQVVSDWDNLPLEKTNNHSYWAAWSVMATSIATNRRDLFDWAVKEYKVGVNQVDDQGFLPNELKRQQRALSYHNYALPPLSMIASFALVNGVDLRQENNSALKRLGDKVLAGVKDPDIFEQKNGKEQDMKDLKEDMKFAWLEPFCTLYTCAPDVIERKHGMQPFKTFRLGGDLTKVYDPAHEKGNKGS*