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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_943_14

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 13789..14229

Top 3 Functional Annotations

Value Algorithm Source
LysM domain/BON superfamily protein n=4 Tax=Pseudomonas RepID=S6H4G6_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 146.0
  • Bit_score: 285
  • Evalue 2.90e-74
phospholipid-binding domain/LysM domain protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 146.0
  • Bit_score: 285
  • Evalue 8.20e-75
Uncharacterized protein {ECO:0000313|EMBL:AFJ57219.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 146.0
  • Bit_score: 285
  • Evalue 4.10e-74

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGAGTATTTTTAGCTTTATCAAAGAAGCCGGCGAAAAGATTGTCGACCTGTTGACGCCGGGTAATGCGAACGCAAGTGAGCAGTTGAAGGAGCATGTGAGCAAGGTGGGCCTGGGTAATCCAAACGTGCAGACCACGGTGGATGGCGACAAGGTCACGGTGACCGGTGAAGTGGCCACGCAGGAAGAGAAAGAGAAGATCCTGTTGGCGCTGGGTAACATTGCCGGCGTGGCAAGTGTGGATGACCAGATCACTGTTACTGGCCCTGCGGTTACCGCTGCTCGCTTCGTCGTAGTGAAAAAGGGCGATACCCTCAGCGCGATTTCCCTGGCGGTGTACGGTAATGCCAACCAGTACAACAAGATTTTCGAGGCTAACAAGCCGCTGCTGTCGCACCCGGACAAGATCTACCCCGGCCAGACACTGCGCATCCCTGAGTAA
PROTEIN sequence
Length: 147
MSIFSFIKEAGEKIVDLLTPGNANASEQLKEHVSKVGLGNPNVQTTVDGDKVTVTGEVATQEEKEKILLALGNIAGVASVDDQITVTGPAVTAARFVVVKKGDTLSAISLAVYGNANQYNKIFEANKPLLSHPDKIYPGQTLRIPE*