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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_338_18

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 16088..16912

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-thiocytidine biosynthesis protein TtcA n=3 Tax=Pseudomonas RepID=I2BTF1_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 274.0
  • Bit_score: 551
  • Evalue 4.10e-154
ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 274.0
  • Bit_score: 551
  • Evalue 1.10e-154
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 274.0
  • Bit_score: 551
  • Evalue 5.70e-154

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGGGCACTCTTACAGTCAACCAGAACAAACTGCAAAAACGCCTGCGTCGCCTGGCCGGTGAAGCGGTCGCCGATTTCAATATGATCGAGGACGGCGACAAGGTCATGGTCTGCCTCTCCGGCGGCAAAGACAGCTACACCATGCTCGACGTGTTGCTGCACCTGCAAAAGGTCGCGCCGATCAAGTTCGAGATCGTGGCGGTCAACATGGACCAGAAACAACCCGGTTTCCCTGAGCATGTGCTGCCGGCCTATTTGAAAGAACTGGGCGTGGAGTACCACATTGTCGAGAAAGACACCTACTCGGTGGTCAAGGAATTGATCCCGGAAGGCAAGACCACCTGCTCGCTGTGCTCGCGCCTGCGCCGTGGCACGCTCTATACCTTTGCCGATGAGATCGGCGCGACCAAGATGGCCTTGGGTCATCACCGCGATGACATCGTCGAAACCTTCTTCCTCAATATGTTCTTCAACGGCTCGCTCAAGGCCATGCCGCCCAAGCTGCGTGCCGATGATGGGCGCAACGTGGTGATCCGCCCGCTGGCGTATTGCAACGAGAAGGACATCCAGGCTTATTCCGACTTCAAGCAGTTCCCGATCATCCCGTGCAACCTGTGCGGCTCCCAGGAAAACCTGCAGCGCCAGGTGGTCAAGGAGATGCTGGTGGACTGGGAGCGCAAGACCCCGGGGCGTACCGAAAGTATCTTCCGCAGCCTGCAAAACGTGATCCCGTCGCAATTGGCCGACCGCAACCTGTTTGACTTCACCAGCTTGAAAATCGATGAGACCGCCGCATCGCGTTTCGTCAATGTAGTGAACCTCTGA
PROTEIN sequence
Length: 275
MGTLTVNQNKLQKRLRRLAGEAVADFNMIEDGDKVMVCLSGGKDSYTMLDVLLHLQKVAPIKFEIVAVNMDQKQPGFPEHVLPAYLKELGVEYHIVEKDTYSVVKELIPEGKTTCSLCSRLRRGTLYTFADEIGATKMALGHHRDDIVETFFLNMFFNGSLKAMPPKLRADDGRNVVIRPLAYCNEKDIQAYSDFKQFPIIPCNLCGSQENLQRQVVKEMLVDWERKTPGRTESIFRSLQNVIPSQLADRNLFDFTSLKIDETAASRFVNVVNL*