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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2773_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 10..267

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L27 n=13 Tax=Pseudomonas RepID=RL27_PSEFS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 85.0
  • Bit_score: 173
  • Evalue 7.20e-41
rpmA; 50S ribosomal protein L27 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 85.0
  • Bit_score: 173
  • Evalue 2.00e-41
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=911243 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 85.0
  • Bit_score: 173
  • Evalue 1.00e-40

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Taxonomy

Pseudomonas sp. CFII68 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 258
ATGGCACACAAAAAAGCTGGTGGTAGTACCCGTAACGGTCGCGACTCAGAAGCCAAACGCCTTGGCGTGAAGATGTATGGCGGCCAGAAAATCATTCCGGGCAACATCATCGTGCGTCAGCGCGGCACCCAATTCCACGCCGGTTACGGTGTTGGCATGGGTAAAGATCACACCCTCTTCGCTAAAATCGAAGGCGTGATCAAGTTCGAAGTAAAGGGCGCGTTCAACCGCCGTTACGTGAGCGTTGTCGCAGCTTAA
PROTEIN sequence
Length: 86
MAHKKAGGSTRNGRDSEAKRLGVKMYGGQKIIPGNIIVRQRGTQFHAGYGVGMGKDHTLFAKIEGVIKFEVKGAFNRRYVSVVAA*