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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1528_4

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(3248..4426)

Top 3 Functional Annotations

Value Algorithm Source
Choline ABC transporter, ATP-binding protein n=3 Tax=Pseudomonas RepID=I2BX50_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 392.0
  • Bit_score: 774
  • Evalue 5.50e-221
choV; choline ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 392.0
  • Bit_score: 774
  • Evalue 1.60e-221
ChoV protein {ECO:0000313|EMBL:AFJ58833.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 392.0
  • Bit_score: 774
  • Evalue 7.70e-221

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGAGCATTATCCGATTCGACAAAGTCGACGTGATCTTTTCCAAAGACCCACGCGAAGCGCTCAAGCTGCTGGACCAGGGCATGAGCCGTAACGAAATTCTGAAGAAGACCGGGCAGATCGTCGGCGTCGAGAACGCCAGCCTGGATATCGAGAAAGGCGAGATCTGTGTGCTGATGGGCCTCTCGGGCTCAGGCAAATCCAGTTTGCTGCGCTGCATCAACGGCCTCAATACCGTCAGCCGTGGCCAGCTGTTTGTGGAGCATGAAGGGCGTCAGATCGACATCGCCTCCTGCACCCCCGCCGAGCTGAAAATGATGCGCACCAAACGCATCGCCATGGTGTTCCAGAAGTTCGCCCTGATGCCTTGGTTGACGGTGCGCGAGAACATCAGCTTCGGCCTGGAAATGCAGGGCCGACCGGAGAAAGAACGGCGCACGCTGGTGGACGAGAAACTCGAACTGGTGGGCCTGAGCCAATGGCGCAACAAGAAGCCCGACGAGTTGTCCGGCGGCATGCAGCAGCGCGTCGGCCTGGCCCGCGCCCTGGCGATGGACGCCGATATCCTGCTGATGGACGAACCCTTCTCGGCCCTCGACCCGCTGATCCGCCAAGGCTTGCAAGATGAACTGCTGGAACTGCAACGCAAGTTGAGCAAGACCATCGTGTTCGTCAGCCACGACCTGGATGAAGCGCTGAAACTGGGCAGCCGTATCGCGATCATGAAAGACGGCAAGATCATCCAGTACAGCGTGCCGGAAGAAATCGTACTGAACCCGGCAGACGACTATGTGCGCACCTTCGTTGCGCATACCAACCCGCTGAACGTGCTGTGCGGACGTAGCCTGATGCGCACGCTGGACAACTGCAAGCGCGTGAACGGTTCGGTGTGTCTTGATCCGGGTGGCGACTCCTGGCTGGACCTGGCCGAAGGCAACACCATCCAGGGCGCACGCCAGAATGGCGTGGCGATGAACCTGCAAAACTGGGCGCCAGGGCAGGCCGTGGAAGGCTTGGGCCGCGTACCGACGCTGGTGGACTCGAACATCGGTATGCGCGATGCACTGCAGATTCGCTACCAGACAGGCAACAAGCTGGTGCTGCACGACAACAACAAGGTGGTGGGGATACTGGGGGACAGTGAGCTCTACCATGCCCTCTTAGGCAAGAACTTGGGCTAA
PROTEIN sequence
Length: 393
MSIIRFDKVDVIFSKDPREALKLLDQGMSRNEILKKTGQIVGVENASLDIEKGEICVLMGLSGSGKSSLLRCINGLNTVSRGQLFVEHEGRQIDIASCTPAELKMMRTKRIAMVFQKFALMPWLTVRENISFGLEMQGRPEKERRTLVDEKLELVGLSQWRNKKPDELSGGMQQRVGLARALAMDADILLMDEPFSALDPLIRQGLQDELLELQRKLSKTIVFVSHDLDEALKLGSRIAIMKDGKIIQYSVPEEIVLNPADDYVRTFVAHTNPLNVLCGRSLMRTLDNCKRVNGSVCLDPGGDSWLDLAEGNTIQGARQNGVAMNLQNWAPGQAVEGLGRVPTLVDSNIGMRDALQIRYQTGNKLVLHDNNKVVGILGDSELYHALLGKNLG*