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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1528_5

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(4423..5268)

Top 3 Functional Annotations

Value Algorithm Source
Choline ABC transporter, permease protein n=5 Tax=Pseudomonas RepID=I2BZ74_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 281.0
  • Bit_score: 551
  • Evalue 5.40e-154
choW; choline ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 281.0
  • Bit_score: 551
  • Evalue 1.50e-154
Binding-protein dependent transport system inner membrane protein {ECO:0000313|EMBL:EZP69112.1}; TaxID=1470593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 281.0
  • Bit_score: 551
  • Evalue 7.60e-154

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Taxonomy

Pseudomonas sp. RIT357 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGCTGACTGAACAGAAAATCCCACTAGGCCAGTACATCGCTGCCTTCGTCGACTGGTTGACCCAACACGGTGCCAACTACTTCGACGCAATCGCATCGACACTGGAAACGATGATCCACGGCGTGACGTTTGCGCTGACCTGGTTCAATCCACTGGCATTGATCGGTCTGATTGCGCTGCTGGCTCACTTTATTCAACGTAAATGGGGACTGACTGTTTTTGTCATCGCCTCCTTCCTGCTGATCCTCAACCTGGGGTACTGGCAGGAAACCATGGAAACCCTCGCACAGGTGCTGTTCGCCACCCTGGTCTGCGTGGTCATCGGTGTGCCGCTGGGCATTGTTGCCGCGCATAAACCAATGTTCTACACCATGATGCGGCCGGTACTCGATCTGATGCAGACCGTGCCGACCTTCGTCTACCTCATCCCTACCCTGACCCTCTTCGGGCTGGGTGTGGTGCCTGGGTTGATTTCCACGGTGGTGTTCGCGATTGCCGCGCCGATCCGCCTGACCTACCTGGGTATCCGCGACGTCCCGCAAGAATTGATGGACGCCGGCAAGGCCTTTGGCTGCTCGCGCCGCCAGTTGCTCTCGCGCATTGAACTGCCCCACGCCATGCCGAGCATCGCCGCCGGCATTACCCAATGCATCATGCTGTCGTTGTCGATGGTGGTGATCGCGGCCCTGGTAGGCGCCGACGGCCTCGGCAAGCCGGTGGTCAACGCACTCAACACCGCCGATATTGCCCTGGGCTTTGAAGCGGGCCTGGCCATTGTGTTGCTCGCCATCATGCTCGACCGTATCTGCAAACAACCCGACGCTAAAGTAGGGGGTGATGCATGA
PROTEIN sequence
Length: 282
MLTEQKIPLGQYIAAFVDWLTQHGANYFDAIASTLETMIHGVTFALTWFNPLALIGLIALLAHFIQRKWGLTVFVIASFLLILNLGYWQETMETLAQVLFATLVCVVIGVPLGIVAAHKPMFYTMMRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGIRDVPQELMDAGKAFGCSRRQLLSRIELPHAMPSIAAGITQCIMLSLSMVVIAALVGADGLGKPVVNALNTADIALGFEAGLAIVLLAIMLDRICKQPDAKVGGDA*