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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1528_6

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(5338..6285)

Top 3 Functional Annotations

Value Algorithm Source
Putative glycine betaine/L-proline ABC transporter substrate-binding protein n=2 Tax=Pseudomonas RepID=S6HF96_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 315.0
  • Bit_score: 634
  • Evalue 5.50e-179
choX; choline ABC transporter, periplasmic choline-binding protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 315.0
  • Bit_score: 634
  • Evalue 7.70e-179
choX; choline ABC transporter, periplasmic choline-binding protein similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 315.0
  • Bit_score: 633
  • Evalue 4.50e-179

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGAAAGGTTCACCCTCGTTGTTGTTGGCCGCCATGCTGAGTCTGCCAGTCGTGGCATACGCCGCAGAACCGGAACAGTGCAAGACCGTCAACTTCTCCGATGTCGGCTGGACCGACATCACCGTCACCACCGCGACCACCAGCGAGATCCTCAAGGGCCTGGGCTACAAGCCGCGCACCACGATGATTTCGGTACCTGTGACTTACAAGTCCCTGGCCGACGGCAAGAACATGGACATTTTCCTCGGCAACTGGATGCCGACCATGGAAAACGACATCAAGCAGTACCGTGATGCCGGCACCGTGGAAACCGTGCGCGCCAACCTGGAGAACGCCAAGTACACCCTGGCGGTCCCAGAGGCGCTGTATGAGAAGGGCCTGAAAGACTTCGCCGACATCGCCAAATTCAAGGATGAGCTGGGCGGCAAGATCTACGGCATCGAGCCGGGCAACGATGGCAACCGCACCATCCAGACACTGATCGACAAAGATGCCTTCGGCCTGAAAACCGCCGGCTTCAAGGTGGTCGAATCCAGCGAAGCCGGCATGCTCTCCCAGGTTGAACGCGCTTCCAAGCGCAACCAGGCCATCGTGTTCCTCGGCTGGGAACCGCACCCGATGAACACCCGCTTCAAGATGAAGTACTTGACCGGTGGTGACGACTCGTTCGGCCCCAATTACGGCCAGGCCACCATCTACACCAACACCCGCAAAGGCTACACCCAGGAATGCAGCAACGTCGGCCAGTTGCTGAAAAACCTGGTGTTCACCCTCGACATGGAAAGCACCCTGATGGGGAACGTCCTGGACGACAAGATGAAGGCCGACGCTGCCGCCAAGGCCTGGTTGCAGAAGAACCCGCAAGTGCTCGACACCTGGCTCGCCGGTGTCACCACCGTTGATGGCAAACCAGGGCTCGATGCCGTTAAAGCTTACCTCGCCAAATAG
PROTEIN sequence
Length: 316
MKGSPSLLLAAMLSLPVVAYAAEPEQCKTVNFSDVGWTDITVTTATTSEILKGLGYKPRTTMISVPVTYKSLADGKNMDIFLGNWMPTMENDIKQYRDAGTVETVRANLENAKYTLAVPEALYEKGLKDFADIAKFKDELGGKIYGIEPGNDGNRTIQTLIDKDAFGLKTAGFKVVESSEAGMLSQVERASKRNQAIVFLGWEPHPMNTRFKMKYLTGGDDSFGPNYGQATIYTNTRKGYTQECSNVGQLLKNLVFTLDMESTLMGNVLDDKMKADAAAKAWLQKNPQVLDTWLAGVTTVDGKPGLDAVKAYLAK*