ggKbase home page

RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_282_21

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 24782..26197

Top 3 Functional Annotations

Value Algorithm Source
Multidrug efflux RND transporter, outer membrane factor lipoprotein OprN n=3 Tax=Pseudomonas RepID=I2BN49_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 471.0
  • Bit_score: 902
  • Evalue 1.60e-259
oprN; multidrug efflux RND transporter, outer membrane factor lipoprotein OprN similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 471.0
  • Bit_score: 902
  • Evalue 4.50e-260
OprN protein {ECO:0000313|EMBL:AFJ55682.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 471.0
  • Bit_score: 902
  • Evalue 2.30e-259

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1416
ATGAGTGTGAAAGTATTCCTGCCGAGCCTGTTGGTGCTGGCGCTCGCCGCCTGTGCCGTAGGCCCGGACTACAAGACCCAGCCACTGGAGGCGGCCAATATCACGGCCGCCGCCGACAGCAAAAGCTACGACCATGCCAAGTACGAAGGCATCTGGTGGCAGCAGTTCGAAGACCCCACGCTCAACCAGCTGGTAACCCAGTCGCTGAGCGGCAACCGTGATTTGCGCGTAGCCTTTGCCCGCCTGCGGGCGGCACGGGCTATCCGTGATGACGCGGCCAACGACATCATGCCGGTGGTCACCTCCCGCGCCAGCAGCGATGTGGGCAAGGGCCAGATTCCCGGGCAGACCACCAAGCGTGTCAACAGCGAGCGCTACGACCTGGGCCTGGACATGGCCTGGGAAGTGGATTTGTTCGGGCGCATCCGCCGCAACCTGGAAGCCAGCGACGCCGACCAACAGGTGGCCGAAGCCGACCTGTACCAACTGCAAGTCACCATGATTGCCGAACTGGTGGATGCCTACGGTCAACTGCGTGGAGCGCAACTGCGTGAACGCATTGCCCTGGACAACCTGAAGAACCAGCAGGAATCGCGCACCATCACCGTCAGCCTGCGTGATGCCGGCGTCGGTGATCAGCTCGACGTGGAACGTGCCGACGCGCGCCTGGCAGCAGTTGAAGCCAGCGTGCCGCAACTGCAGGCCGAACAAGTGCGCGAGCGCAACCGCATCGCCACCCTCCTCGGCCAGCGCCCCGACAAACTGAGCGTGGACCTGAGCCCGAAAGACCTGCCAGCGATTGCCAAGGCGTTGCCGATTGGCGACCCGGGGCAACTGCTGCAACGACGCCCGGACATCCTCAGCGCCGAACGCAAACTGGCCGCCGCCACCGCACGTATCGGCGTGGCCAAGGCCGACCTGTTCCCACGGGTGAGCCTCAGCGGTTTCCTCGGGTTCACCGCCGGGCGCGGTTCGCAGATCGGCTCCGCCGCGGCGAATGCCTGGTCCCTGGGCCCGAGCATCACGTGGGCCGCGTTTGACCTGGGCAGCGTGCGTGCGCGTCTGCGTGGCGCGAATGCCGAAGCCGATGGCGCGTTGGCGACCTATGAACAGCAAGTGTTGCTGGCATTGGAAGAGTCCGAGAACGCCTTCAGCGATTACGGCAAGCGCCAGCAACGCCTGGTCTCGCTGATCCGCCAAAGCGAATCCAGCCGCGCCGCCGCCGACCTCGCGGCGATCCGCTATCGCGAAGGCACCGTGGACTTCCTGGTACTGCTCGACGCCCAGCGCGAACGCCTGGCCGCCGAAGACGCCCAGGCCCAGGCCGAAGTGGATCTGTATCGCGGCATCGTGGCGATCTACAAGGCCTTGGGTGGTGGCTGGCAGCCGGATACGGTGGTCGCCAGCAACCGGTGA
PROTEIN sequence
Length: 472
MSVKVFLPSLLVLALAACAVGPDYKTQPLEAANITAAADSKSYDHAKYEGIWWQQFEDPTLNQLVTQSLSGNRDLRVAFARLRAARAIRDDAANDIMPVVTSRASSDVGKGQIPGQTTKRVNSERYDLGLDMAWEVDLFGRIRRNLEASDADQQVAEADLYQLQVTMIAELVDAYGQLRGAQLRERIALDNLKNQQESRTITVSLRDAGVGDQLDVERADARLAAVEASVPQLQAEQVRERNRIATLLGQRPDKLSVDLSPKDLPAIAKALPIGDPGQLLQRRPDILSAERKLAAATARIGVAKADLFPRVSLSGFLGFTAGRGSQIGSAAANAWSLGPSITWAAFDLGSVRARLRGANAEADGALATYEQQVLLALEESENAFSDYGKRQQRLVSLIRQSESSRAAADLAAIRYREGTVDFLVLLDAQRERLAAEDAQAQAEVDLYRGIVAIYKALGGGWQPDTVVASNR*