ggKbase home page

RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_128181_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 1..279

Top 3 Functional Annotations

Value Algorithm Source
Alginate biosynthesis transcriptional activator AlgZ n=8 Tax=Pseudomonas RepID=I2BN70_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 92.0
  • Bit_score: 178
  • Evalue 3.20e-42
Alginate biosynthesis transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 92.0
  • Bit_score: 178
  • Evalue 8.90e-43
AlgZ protein {ECO:0000313|EMBL:AFJ55703.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 92.0
  • Bit_score: 178
  • Evalue 4.40e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 279
TTCGTCGTACGTCTGCCAGACGGAATGCGGGAACGCATTGCCGAGGTGGCTCGCAATCATCACCGCAGCATGAACTCCGAAATCATCGCACGCCTGGAACAAAGCCTTATTCAGGAAGGTGCCTTGGGTGAAGAGTTGAGCATGCGCCTGGACAGCCCCGAGCTGTCACTGCACGAACGCGAACTGCTGCAGCGTTTTCGTCAGCTCTCCCACCGCCAGCAAAATGCTCTCGTCTCGCTTATCGCGCATGACGTGGAGGCGGCCGCAGAAGCCAATTGA
PROTEIN sequence
Length: 93
FVVRLPDGMRERIAEVARNHHRSMNSEIIARLEQSLIQEGALGEELSMRLDSPELSLHERELLQRFRQLSHRQQNALVSLIAHDVEAAAEAN*