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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_50838_7

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 3232..3852

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=36 Tax=Pseudomonas RepID=RS4_PSEFS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 406
  • Evalue 1.20e-110
SSU ribosomal protein S4p (S9e) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 406
  • Evalue 3.40e-111
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1144339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 406
  • Evalue 1.70e-110

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Taxonomy

Pseudomonas sp. GM80 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGGCTCGTTACATTGGTCCAAAATGCAAACTCGCTCGTCGCGAAGGCACCGATCTCTTCCTGAAGAGCGGCGTGCGCGCGATCGAATCGAAGTGCAACATTGAAGCAGCACCTGGTATCCACGGCCAACGCCGCGGTCGCCAGTCCGACTACGGCACCCAACTGCGTGAAAAGCAGAAGGTCCGTCGTATCTACGGCGTTCTCGAGCGTCAGTTCAGCGGCTACTACAAAGAAGCTGCTGGCAAGAAAGGTGCAACCGGTGAAAACCTGCTGCAACTGCTCGAATGCCGTCTGGACAACGTTGTATACCGTATGGGCTTCGGTTCGACTCGTGCCGAATCCCGTCAGCTGGTATCGCACAAGTCGATCAGCGTTAACGGTCAGACCGTAAACGTTCCGTCCTACCAGGTTCGTGCTGGTGACGTGGTCGCAGTTCGCGAGAAAGCAAAAAACCAACTTCGCATTGTCCAAGCTCTCGATCTGTGTGCCCAACGTGGCCGCGTAGAATGGGTAGAAGTAGACACTGAGAAGAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGTGATCTGTCCGCCGACATCAACGAAAGCCTGATTGTCGAGCTCTACTCCAAGTAA
PROTEIN sequence
Length: 207
MARYIGPKCKLARREGTDLFLKSGVRAIESKCNIEAAPGIHGQRRGRQSDYGTQLREKQKVRRIYGVLERQFSGYYKEAAGKKGATGENLLQLLECRLDNVVYRMGFGSTRAESRQLVSHKSISVNGQTVNVPSYQVRAGDVVAVREKAKNQLRIVQALDLCAQRGRVEWVEVDTEKKSGVFKNVPARSDLSADINESLIVELYSK*