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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_24

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(20794..21891)

Top 3 Functional Annotations

Value Algorithm Source
Putative sigma54-dependent regulatory protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6IPT2_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 365.0
  • Bit_score: 717
  • Evalue 9.70e-204
sigma-54 dependent transcriptional regulator Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 365.0
  • Bit_score: 717
  • Evalue 1.40e-203
sigma-54 dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 365.0
  • Bit_score: 715
  • Evalue 6.10e-204
  • rbh

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1098
ATGCAGCTGTTCACCCTGCCGCCCTCGCCTGCCCTCGCGACCTCGATCCGCGCCACAGCCCAGGTCTTCGAAGACCCAAAGTCCCAGGCCCTGCTCGACCATATCCAGCAAGTGGCCCCCAGCGAGGCCAGCGTGCTGATCATCGGCGAAACCGGCACCGGCAAAGAGCTTGTTGCGCGGCATATCCACCACCTCAGTACGCGGCGAAATCGGCCCTTCGTGGCAGTGAACTGCGGGGCTTTTTCGCAAGCACTAGTGGAAGCCGAGTTGTTCGGCCATGAGAAAGGCGCCTTTACCGGTGCCCTCAGCGCCAAGGCCGGCTGGTTCGAAGAGGCTGACGGCGGCACCTTGTTTCTGGATGAGATCGGCGATTTGCCGATGGCCATCCAGGTCAAACTGCTGCGGGTGCTACAGGAGCGTGAGGTGGTGCGCCTGGGTTCGCGCAAAAGCATTGCAATCGATGTGCGAGTCCTGGCCGCCACCAATGTACAACTGGAACAGGCCATCAACGCCGGGCATTTCCGTGAAGACCTCTACTACCGCCTCAATGTAGTCAGCCTGGAACTGAGCCCGCTGCGCGAACGTACCGGCGATATCCTGCCGCTGACCCGGCACTTCATCCAAACCTACAGCCAGCGCCTGGGCTACGGTCCGATCAGCGTGAGCCACGAGGCCGAGCACAAGCTCAAGCGCTACAGCTGGCCGGGTAATATCCGTGAGCTGGAAAACGTGATTCATCACACCCTGCTGGTCTGCCGCAACGCTGTGATCGAACCCGACGACCTGCGCCTGTCGAACCTGCGCATCGAACGCCAGAACGACAGCGACACCGATACCTGTGCAGAAGCCCTGCTGGCGCGGGCGTTTCAAAGGCTCTTCGAGGAACAGTCCGGCGCCCTGCATGAAAAGGTCGAGGACGCCTTATTGCGCGCTGCTTATCACTTCAGCCACTACAACCAAGTACACACCGCCACCTTGCTGGGACTGAGCCGCAACGTCGCTCGCGCTCGCCTGATCAAGATCGGCGAACTGGCGGTCAACAAGCGCAGGCCCGGGAAAAATGCGCAAGGCGAACGGATGCTGCACCTATCCATTTAG
PROTEIN sequence
Length: 366
MQLFTLPPSPALATSIRATAQVFEDPKSQALLDHIQQVAPSEASVLIIGETGTGKELVARHIHHLSTRRNRPFVAVNCGAFSQALVEAELFGHEKGAFTGALSAKAGWFEEADGGTLFLDEIGDLPMAIQVKLLRVLQEREVVRLGSRKSIAIDVRVLAATNVQLEQAINAGHFREDLYYRLNVVSLELSPLRERTGDILPLTRHFIQTYSQRLGYGPISVSHEAEHKLKRYSWPGNIRELENVIHHTLLVCRNAVIEPDDLRLSNLRIERQNDSDTDTCAEALLARAFQRLFEEQSGALHEKVEDALLRAAYHFSHYNQVHTATLLGLSRNVARARLIKIGELAVNKRRPGKNAQGERMLHLSI*