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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_66949_3

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 1403..2161

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus biogenesis/stability protein PilF n=3 Tax=Pseudomonas RepID=I2BQJ1_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 252.0
  • Bit_score: 497
  • Evalue 6.40e-138
pilF; type IV pilus biogenesis/stability protein PilF similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 252.0
  • Bit_score: 497
  • Evalue 1.80e-138
PilF protein {ECO:0000313|EMBL:AFJ56524.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 252.0
  • Bit_score: 497
  • Evalue 9.00e-138

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGCCCTTGCGCCTTGCGCTGCTTTTACTGTTTACCGGCCTCGTGGCCGGTTGCGTTTCATCGGGCCATGACAGCCCGTTGCGCACTGATAAAGGCCGTGATGAGGCGCGGGTTGCCTATGTGCAACTGGGTTTGGGGTACCTGCGCCAAGGCATGAGCGAGCAGGCCAAGGTGCCGTTGAAAAAGGCCCTTGAGCTGGACGCTGATGATGCCGATGCCAACGCCGCGCTGGCCCTGGTGTTTCAGGCTCAGGCTGAGCCCGAGCTGGCCGACCGCTATTTTCACAAGGCCCTGGCCTCCCGCCCTGCCGATCCGCGGCTGCTGAATAACTACGGCAGTTTCTTGTTCGAGCAGAAACGGTATGACCTGGCGTCACGTTATTTCCAGCAAGCCGCCACCGATACTCTCTACCCGCAGCGTTCGCGGGTGTTCGAGAACCTTGGTGTGACCTCGATGCGCCTCGGCCAGCGCGACAGCGCCCGCCAGCAACTGGAAAAAGCCCTGCACCTGAACAGTCGCCAGCCACGGGCATTACTCGAAATGGCTGAGTTGTCTTACGAAGACAGGCATTATGTGCCGGCACGTGACTATTACGAGCGTTTTAGCCTGCTCAGCGGGCAAAATGCACGTAGTCTATTGCTCGGTGTGCGCCTGGCGACGGTTCATGAAGAACACGACACGGCCGCACGTTTTGGCCAGCAACTCGAACGACTCTATCCCGGTACGCCGGAATATCAGCAATACCTGTCGGAGCAATGA
PROTEIN sequence
Length: 253
MPLRLALLLLFTGLVAGCVSSGHDSPLRTDKGRDEARVAYVQLGLGYLRQGMSEQAKVPLKKALELDADDADANAALALVFQAQAEPELADRYFHKALASRPADPRLLNNYGSFLFEQKRYDLASRYFQQAATDTLYPQRSRVFENLGVTSMRLGQRDSARQQLEKALHLNSRQPRALLEMAELSYEDRHYVPARDYYERFSLLSGQNARSLLLGVRLATVHEEHDTAARFGQQLERLYPGTPEYQQYLSEQ*