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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_50328_6

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(3504..3890)

Top 3 Functional Annotations

Value Algorithm Source
NifU family protein n=9 Tax=Pseudomonas RepID=C3K1M4_PSEFS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 128.0
  • Bit_score: 258
  • Evalue 4.40e-66
iscU; FeS cluster assembly scaffold IscU similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 128.0
  • Bit_score: 258
  • Evalue 1.20e-66
Scaffolding protein {ECO:0000313|EMBL:KJZ58193.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 128.0
  • Bit_score: 258
  • Evalue 6.10e-66

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGGCTTACAGCGAAAAGGTCATCGACCACTACGAAAACCCGCGCAACGTCGGCAAGATGAACGCGGAAGATCCAGATGTCGGCACCGGCATGGTCGGCGCCCCGGCGTGCGGCGATGTAATGCGCCTGCAGATCAAGGTCAATGATGCTGGCGTTATCGAAGACGCCAAATTCAAGACTTACGGCTGCGGTTCGGCCATCGCCTCCAGCTCCCTGGCGACCGAATGGATGAAAGGCAAGACCCTGGATGAGGCTGTCACCATCAGCAACACCCAGCTGGCCGAAGAACTGGCGTTGCCGCCAGTGAAAATCCACTGCTCCGTACTCGCTGAAGATGCCATCAAGGCAGCTGTTCGCGACTACAAGCAGAAGAAAGGCTTGATCTAA
PROTEIN sequence
Length: 129
MAYSEKVIDHYENPRNVGKMNAEDPDVGTGMVGAPACGDVMRLQIKVNDAGVIEDAKFKTYGCGSAIASSSLATEWMKGKTLDEAVTISNTQLAEELALPPVKIHCSVLAEDAIKAAVRDYKQKKGLI*