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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_25

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(27473..27790)

Top 3 Functional Annotations

Value Algorithm Source
Putative type III secretion effector protein n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4K5R7_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 104.0
  • Bit_score: 147
  • Evalue 8.90e-33
type III secretion effector protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 105.0
  • Bit_score: 217
  • Evalue 1.30e-53
type III secretion effector protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 214
  • Evalue 1.30e-53

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGACTTCAGCCTCGTTTAATTCTTCCCCAAACGGTCCCATCGACCTGTTGCGCAGTACCCAACGTACAAGTCCACCAGTATCCAAGGAGCGCGGCCCCTCGCGTAGCTTCCCTTTTGCGTCGACGGAATATGAGGCAGAAGCACGGCGTATGAAGGCTTATGCCGGCGAGCGTAGATTCCAGGCGCCCGTGTCGGACGACTTTTCCCGGGGCATGCTGGCAGACCCGCAGGTCAGGGGGGAGGGCGCCGATTCGTTGAACGACACGGGGTTGATCAATTGCCTGGCAGGCTGGTGGCGTAGGCGCAAGCTGGGTTAA
PROTEIN sequence
Length: 106
MTSASFNSSPNGPIDLLRSTQRTSPPVSKERGPSRSFPFASTEYEAEARRMKAYAGERRFQAPVSDDFSRGMLADPQVRGEGADSLNDTGLINCLAGWWRRRKLG*