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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_28

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(31677..32627)

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor regulatory protein, FecR/PupR family n=3 Tax=Pseudomonas RepID=I2BYU8_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 316.0
  • Bit_score: 615
  • Evalue 3.40e-173
sigma factor regulatory protein, FecR/PupR family Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 316.0
  • Bit_score: 617
  • Evalue 9.70e-174
sigma factor regulatory protein, FecR/PupR family similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 316.0
  • Bit_score: 615
  • Evalue 9.70e-174

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGGATAACCGTGTCCGTGATGAGGCCGCGCAGTGGTTTGTACGCCTGCAAGACGGCCCATTGAGCGCCCAGGAACGTCAACGTTTCGATGCCTGGCGCAGGTCGCAGCCCGCGCATCAGTACGAAATCGATGTGCTGCAAGGGCTATGGAGTGCGACGGATTTGCTGCCCAAGGCCCGCTTGCAGGCGCTGGGCGATGCGCCAACCGAGCGCCTTGGACGGCGTGCGCTTCTGCGTTATGCCGTGGCCGCCAGGGTGGTCGCCGTTGCAGTGGGCCTGGGTGCGTACAGCGGTCTGGGGCAGCCAAAGCCCTACAATGCCGAATTCAGCACTCGGTTAGGCGAGCATCGTCAGGTGACCTTGCCTGACGGTTCCGTGATGGACCTCAACAGCCGCAGCGTGGTCGCGGTTCGCTACGAAAAGAGCCGTCGGGGCGTAGAGCTCAAGCAGGGCGAGGCGATGTTCAGCGTGCAACATGACGCCGAACGCCCGTTTGTGGTCGCAGCCGGGGCAGGGCAGGTGACCGTCACCGGCACGCGCTTTGATGTACGTCGGGAGGCGGACCAGACCCGCGTGGCGGTCGAAGCCGGCACGGTCAAGGTGCAGGGCCGGGCATCCGATCACATCGTCACGCTCACCGCCGGGCGTGGCACCCATGTCGATCCCCAAGGCCAAGTGGCGGCGGCCTACGCGGTGAACCCTGAAGAACTGACCGCGTGGCGCAGCGGTAAACTAGTGTTCAACAACGCCACCCTGGTAGACGTGGCGCGGGAAGTGTCGCGCTACCGCGAGCAACCGCTGCGGGTCAGTACGGCAGCGGTGGGCAACCTGCGCTTGACCAGCGTCTTCAAATCCAGCGACACCGACGCTTTGCTCAAGGCCTTGCCCCACATCCTGCCGGTCGCCTTGCGCACTTTGCCGGACGGTAGCCAGGAAATTATTTCACGCTGA
PROTEIN sequence
Length: 317
MDNRVRDEAAQWFVRLQDGPLSAQERQRFDAWRRSQPAHQYEIDVLQGLWSATDLLPKARLQALGDAPTERLGRRALLRYAVAARVVAVAVGLGAYSGLGQPKPYNAEFSTRLGEHRQVTLPDGSVMDLNSRSVVAVRYEKSRRGVELKQGEAMFSVQHDAERPFVVAAGAGQVTVTGTRFDVRREADQTRVAVEAGTVKVQGRASDHIVTLTAGRGTHVDPQGQVAAAYAVNPEELTAWRSGKLVFNNATLVDVAREVSRYREQPLRVSTAAVGNLRLTSVFKSSDTDALLKALPHILPVALRTLPDGSQEIISR*