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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_22

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 24770..25297

Top 3 Functional Annotations

Value Algorithm Source
Putative C4-dicarboxylate transporter small subunit n=2 Tax=Pseudomonas RepID=S6H406_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 175.0
  • Bit_score: 351
  • Evalue 6.70e-94
TRAP dicarboxylate transporter subunit DctQ Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 175.0
  • Bit_score: 352
  • Evalue 3.20e-94
TRAP dicarboxylate transporter subunit DctQ similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 175.0
  • Bit_score: 346
  • Evalue 4.70e-93

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGAAGACTTTACTGCTGCGCTTCAATGACTGCCTTTACATGACCTGTATCTGGGTCGCCGGCCTTTCGGTCCTGGGGGTGGCCTTGATCATTCCCTGGGGTATCTTCACCCGCTACGCCCTCGGTACCGGTTCCAGCTGGCCGGAGCCCACCGCCATCCTCCTGATGCTGGTGTTCACCTTTATCGGCGCCGCTGCCAGTTACCGTGCCGGCGCGCACATGTCGGTGGCGATGATCACTGACCGCTTGCCGCCCGTCCAACGCCGCCTCGTCGGCATCCTCTCGCAACTGCTGATGGGCACCATCTGCGTGTTCATGACGATTTGGGGCACCAAGCTGTGCCTGTCCACCTGGAACCAATTCATGAGCGCCATCCCTACCCTGCGCGTAGGCATCACCTATATGCCGATCCCGATTGGCGGCGTGCTGACCCTGGTGTTCGTGGTCGAAAAGCTGCTGCTCGGTGATCAGAGCAACCGCAAGGTGGTGCGTTTCGACCTGGTTGAAGAAAACGAAGGGGCCGCCTGA
PROTEIN sequence
Length: 176
MKTLLLRFNDCLYMTCIWVAGLSVLGVALIIPWGIFTRYALGTGSSWPEPTAILLMLVFTFIGAAASYRAGAHMSVAMITDRLPPVQRRLVGILSQLLMGTICVFMTIWGTKLCLSTWNQFMSAIPTLRVGITYMPIPIGGVLTLVFVVEKLLLGDQSNRKVVRFDLVEENEGAA*