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scnpilot_p_inoc_scaffold_5361_12

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: comp(5288..5908)

Top 3 Functional Annotations

Value Algorithm Source
rplD; 50S ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 206.0
  • Bit_score: 385
  • Evalue 8.20e-105
50S ribosomal protein L4/L1e; K02926 large subunit ribosomal protein L4 id=12553580 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 207.0
  • Bit_score: 385
  • Evalue 2.90e-104
  • rbh
rplD; 50S ribosomal protein L4 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 206.0
  • Bit_score: 385
  • Evalue 4.10e-104

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGCAGCTCGAACTCCTCAATGACCAAGGCCAGGGCGCGAGCAAGCTCGACGTTCCCGAAACCGTGTTTGGCCGCGAATACAACGAAGATCTGGTCCACCAGATCGTCGTCGCCTACCGTGCCAACGGCCGTCAGGGCACCCGTGCCCAGAAGGACCGCGAGCAGGTTCGCCACTCGACCAAGAAGCCTTTCAAGCAAAAGGGCACCGGCCGCGCACGCGCCGGTATGACCTCCTCGCCGCTGTGGCGTGGGGGCGGCCGCATCTTCCCGAACCTGCCTGACGAAAACTTCACGCAGAAGATCAACAAGAAGATGTACCGCGCCGGCATGGCATCCATCCTCTCGCAGCTGGCCCGCGAAGGCCGCCTGGCGGTGGTGGATTCGCTCAAGCTCGATTCGCCCAAGACCAAGGTGCTGGCCGACAAGTTCAAGGCCATGAACCTGCAGTCCGTGATGGTGATCGCCGACGAAGTCGATGAAAACCTGTACCTCGCGTCGCGCAACCTGGTCAATGTGTACGTGGTCGAACCGCGCTACGCCGACCCGGTGTCGCTGGTGCACTACAAGAAGGTCATCGTCACCAAGGCTGCAATCGACCAACTCAAGGAGATGTTCGCATGA
PROTEIN sequence
Length: 207
MQLELLNDQGQGASKLDVPETVFGREYNEDLVHQIVVAYRANGRQGTRAQKDREQVRHSTKKPFKQKGTGRARAGMTSSPLWRGGGRIFPNLPDENFTQKINKKMYRAGMASILSQLAREGRLAVVDSLKLDSPKTKVLADKFKAMNLQSVMVIADEVDENLYLASRNLVNVYVVEPRYADPVSLVHYKKVIVTKAAIDQLKEMFA*