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scnpilot_p_inoc_scaffold_5361_13

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: comp(5908..6582)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6A1_ACIDE similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 224.0
  • Bit_score: 413
  • Evalue 1.80e-112
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovora similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 224.0
  • Bit_score: 413
  • Evalue 2.00e-112
rplC; 50S ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 92.0
  • Coverage: 224.0
  • Bit_score: 412
  • Evalue 6.80e-113

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Taxonomy

Acidovorax temperans → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGAGTCTGAGCAACTCCCTCGGGTTGCTGGGCCGCAAGGTTGGCATGATGCGTTTGTTCACCGACGAAGGGGACGCAGTTCCCGTCACGGTGGTCGACGTATCCAACAACCGCGTCACCCAGGTCAAAACCCAAGCGAACGATGGCTACGTGGCCCTGCAGGTCACGTTCGGTGCGCGCCGGGCCTCCCGCGTCACCAAGCCCGCCGCCGGCCACCTTGCCAAGGCAGGGGTCGAAGCCGGTGAAATCATCCAGGAATTCCGCGTGAGCGCGGACGTCGCCGGCAAGTACGCCGCCGGCGCCACCGTGCCGGTGGCCGACCTGTTCACCGTGGGCCAGAAGGTCGATGTGCAAGGCACCTCGATCGGTAAGGGCTACGCCGGCACCATCAAGCGCCACAACATGGCTTCCCAGCGCGCGTCGCACGGCAACAGCCGTTCGCACAATGTGCCGGGCTCCATCGGTATGGCGCAAGACCCGGGTCGCGTGTTTCCCGGCAAGCGCATGACCGGCCACCTCGGCGACGTCACGGTCACCACCCAAAACCTCGACGTGGTTCGCATCGACGAAGCACGCCAACTGCTCTTGATCAAGGGCGCTGTGCCGGGCTCCAAGGGTGGGTTCGTCACGGTCCGTCCGGCCGTCAAGGCCACCGCTGCCAAAGGAGCGAACTGA
PROTEIN sequence
Length: 225
MSLSNSLGLLGRKVGMMRLFTDEGDAVPVTVVDVSNNRVTQVKTQANDGYVALQVTFGARRASRVTKPAAGHLAKAGVEAGEIIQEFRVSADVAGKYAAGATVPVADLFTVGQKVDVQGTSIGKGYAGTIKRHNMASQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTVTTQNLDVVRIDEARQLLLIKGAVPGSKGGFVTVRPAVKATAAKGAN*