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scnpilot_p_inoc_scaffold_5367_5

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: comp(5248..5769)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-4-methyl-2-oxoglutarate aldolase {ECO:0000256|RuleBase:RU004338, ECO:0000256|SAAS:SAAS00063993}; Short=HMG aldolase {ECO:0000256|RuleBase:RU004338};; EC=4.1.1.3 {ECO:0000256|RuleBase:RU00433 similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 164.0
  • Bit_score: 245
  • Evalue 4.20e-62
ribonuclease n=1 Tax=Acidovorax radicis RepID=UPI00023765EF similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 171.0
  • Bit_score: 241
  • Evalue 7.40e-61
ribonuclease activity regulator protein RraA similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 168.0
  • Bit_score: 237
  • Evalue 3.90e-60

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Taxonomy

Acidovorax temperans → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGCCCCAGGCCGCCGCCCCCGCCGCTGCTTTTTCCACCTGCGATTTCTGCGACCTGCACACGCAGGAGCAGGGCGGCCCGTTTCGCGTGCTGCCACCCGGCCTGCAGTCGTTCGGCGGGCGCACGGCTTTTTTCGGCCAGGTGAGCACGGTCCAGTGCTTTGAAGACAATTCGCTCGTCAAGGCGGCGCTTGACACCCCCGGCGCCGGCCGGGTGCTGGTGGTCGATGGCGCCGGGTCGCTGCGCCGGGCGCTGGTGGGCGGCAACGTGGCCGCCGCCGCGGCACGCAACGGCTGGGCCGGCGTGGTCGTCCATGGCTGTGTGCGCGATGCAGAGGAACTGGCCGCCGCCGGCGTGGGCATACGCGCGCTGGGCCTTGTGCCCATGCCCACCGTCAAGCGCGGTGAAGGCCAGCGCGACGTGCCGGTCGCCGTGCTCGGCGTCTGGATACACCCGGGCGACTGGCTGTACGCCGACCAGGACGGGGTGGTCGTGAACGACACCCCCTTGCACGCCGGCTGA
PROTEIN sequence
Length: 174
MPQAAAPAAAFSTCDFCDLHTQEQGGPFRVLPPGLQSFGGRTAFFGQVSTVQCFEDNSLVKAALDTPGAGRVLVVDGAGSLRRALVGGNVAAAAARNGWAGVVVHGCVRDAEELAAAGVGIRALGLVPMPTVKRGEGQRDVPVAVLGVWIHPGDWLYADQDGVVVNDTPLHAG*