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scnpilot_p_inoc_scaffold_5392_4

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: 3143..4078

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-32 subunit RpoH; K03089 RNA polymerase sigma-32 factor id=12549795 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 312.0
  • Bit_score: 555
  • Evalue 4.20e-155
RNA polymerase sigma factor rpoh; K03089 RNA polymerase sigma-32 factor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 311.0
  • Bit_score: 552
  • Evalue 3.80e-154
RNA polymerase sigma-32 subunit RpoH similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 311.0
  • Bit_score: 537
  • Evalue 1.90e-150

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGAAGCTCCCCTCTGCAACGACGACTGCTGCGCTGGCACCCGCCAACCCGTGGGCGCTGGTGCCGCCCCTGGGGAATCTGGACGCCTACATTTCCGCCGTCAACCGCCTGCCCCTCCTCACCCTGGAAGAAGAGCAGGCCGCCGCGCGCAGCCTGCGACAGGACAACGACCTTGACGCCGCCGGCCGGCTGGTCATGTCGCACCTGCGCCTGGTGGTGTCGATCTCGCGCCAGTACCTGGGCTACGGCCTGCCGCACGGCGACCTGATCCAGGAAGGCAACGTGGGCCTGATGAAAGCCGTCAAGCGCTTCGATCCCGACCAGGGCGTGCGCCTGGTGAGCTACGCCATGCACTGGATCAAGGCGGAAATCCACGAGTACATCCTGAAGAACTGGCGCATGGTCAAGGTGGCGACCACCAAGGCGCAGCGCAAGCTGTTCTTCAATCTGCGCTCCATGAAGCAAGGTTTCAAGGCCGGTGCCGAGGACGCGGACACACACCGCAACACGCTCTCGGAACGCGAAATCGACCAGATGGCGGCGCAACTCAACGTCAAGCGCGAGGAAGTCATCGAGATGGAAACGCGCATGTCGGGCGGCGACGTGCTGCTCGACCCGGCGCCCACGGACGACGCCGACCAGGCGTTCGGCCCCATCGCCTACCTGGCCGACGCCTCGCACGAGCCGACGGCGATGATCGAGTCGCGCCAGCGCGACGTGCTTGCCAGCGACGGCATTGCCAACGCCCTGACCGGGCTGGACGAGCGCAGCCGCCGCATCGTGGAAGAGCGCTGGCTGAACGTGAACGACGACGGCTCCGGCGGCATGACGCTGCACGAGCTGGCGGCAGAATACGGCGTGAGCGCCGAACGCATCCGGCAGATCGAGGTCGCCGCGATGAAGAAGATGAGAAAGAGCCTGGCCGAATACGCCTGA
PROTEIN sequence
Length: 312
MKLPSATTTAALAPANPWALVPPLGNLDAYISAVNRLPLLTLEEEQAAARSLRQDNDLDAAGRLVMSHLRLVVSISRQYLGYGLPHGDLIQEGNVGLMKAVKRFDPDQGVRLVSYAMHWIKAEIHEYILKNWRMVKVATTKAQRKLFFNLRSMKQGFKAGAEDADTHRNTLSEREIDQMAAQLNVKREEVIEMETRMSGGDVLLDPAPTDDADQAFGPIAYLADASHEPTAMIESRQRDVLASDGIANALTGLDERSRRIVEERWLNVNDDGSGGMTLHELAAEYGVSAERIRQIEVAAMKKMRKSLAEYA*