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scnpilot_p_inoc_scaffold_4609_6

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: 4487..5695

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein F n=1 Tax=Acidovorax radicis RepID=UPI00023762FB similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 402.0
  • Bit_score: 587
  • Evalue 9.80e-165
type ii secretion system f domain protein; K02455 general secretion pathway protein F Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 402.0
  • Bit_score: 588
  • Evalue 8.10e-165
type II secretion system F domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 406.0
  • Bit_score: 564
  • Evalue 1.90e-158

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Taxonomy

R_Burkholderiales_64_960 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1209
ATGACTGAATTCCATTACACCGGCCTCGCGGGCGACGGCAAATCCTGCCAGGGAACGCTGCGAGCGCCCACGCCGGAGGCCGCGCGCATGCGGCTCATCGGGCAGGGCGTCACGCCGGTTCGCATCGAGGCCTCGCAGGGCGCGGGCACAGACCAGGCACCGCGCGCCGCCGGCGCACGGCTCAAGCGCAGCGAGGTGCTGTTGTTCACCCGGGAGATGGCGCATCTCAAACAGGCCAACATGCCGCTGGACAAGGCGCTGGCGCTTCTGAGGGATACGGCGGCCACCGAGCGCCTGAAGCAGTTCATTGCGGCACTGGACGCTGGGATTCGCGGTGGCAAGTCGCTCTATGCGGCGATGTTGCCGTTCGAGGCAGATTTCGGAAAGCAGTACCTGGTGTTGATCCGGGCAGGGGAAACGTCGGGTTCGTTGAACGTGGTGCTGAAAGAGCTGTCGGTGCAACTGGAGACGGATGACAAGCTGCGCAATTACGTCATCTCATCGATGACCTATCCGCTGATTCTGCTCGTGGTGTCGGTGCTCTCCGTGGCATTGCTGCTGGCATTCGTGGTGCCGCAGTTTCGCGAAATTTTCGATTCCATGGGCGATGCGCTGCCTTATTCCACCAAACTGGTCATCGGCCTGAGCGATTTTGTGCGCGACCATTGGATGGCGCTGCTGGCGGCGCTGGCCGCGGGGCTGCTTTTCCTGTCCCGCTGGAGTGCCACGCCCCAGGGGCGTATTCGTTTGCACAGCGCGGTGCTTTCAATTCCCTTGATGGGCAAGGTAATCAAGAACCTGCAGTTTGCGGTTTATTTCCGAACGTTTGGCAACTTGCTGCAACGCGGCGTACCCATGGTGGATGCGCTGCGTATTTCCGTGGATACGCTCACCAATACCGCGTTGCGCAAGGATTTCGAGCCCTTGGTGGATATCGTCAAAACCGGCAAGCGCTTGTCTGCGGGGTTCGTATCGCGGCATTTTGAAAAAACTGGCACCCCGCAACTGATCCGGGTCGCCGAAGAAACCGGACAAATGGATGGCACTTTGCTCAGTTTGGCCGATCGCTACGAGGACCAGGGACGCCGAACCATGGATCGGATGCTCGCCACCATGGAGCCCATCATCATCATCTTGCTGGGCGCTTTGGTCGCCTTCATCATCGTGGCCATCTTGGGCGGTGTGCTTTCCATCAACGACACCATTTGA
PROTEIN sequence
Length: 403
MTEFHYTGLAGDGKSCQGTLRAPTPEAARMRLIGQGVTPVRIEASQGAGTDQAPRAAGARLKRSEVLLFTREMAHLKQANMPLDKALALLRDTAATERLKQFIAALDAGIRGGKSLYAAMLPFEADFGKQYLVLIRAGETSGSLNVVLKELSVQLETDDKLRNYVISSMTYPLILLVVSVLSVALLLAFVVPQFREIFDSMGDALPYSTKLVIGLSDFVRDHWMALLAALAAGLLFLSRWSATPQGRIRLHSAVLSIPLMGKVIKNLQFAVYFRTFGNLLQRGVPMVDALRISVDTLTNTALRKDFEPLVDIVKTGKRLSAGFVSRHFEKTGTPQLIRVAEETGQMDGTLLSLADRYEDQGRRTMDRMLATMEPIIIILLGALVAFIIVAILGGVLSINDTI*