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scnpilot_p_inoc_scaffold_4677_1

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: 2..502

Top 3 Functional Annotations

Value Algorithm Source
Squalene synthase hpnd {ECO:0000313|EMBL:GAO20778.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 166.0
  • Bit_score: 302
  • Evalue 4.80e-79
squalene/phytoene synthase id=12553117 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 167.0
  • Bit_score: 296
  • Evalue 1.90e-77
Squalene/phytoene synthase similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 166.0
  • Bit_score: 287
  • Evalue 3.20e-75

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
CTCGACTATGCCGGCCTGCAGCGCTATTGCCACCTGGTGGCCGGCGTGGTTGGCGAGGTCGCGGCGCGCATCTTCGGCCAGACCGAGGCGGCAACCACGCGCTACGCCCACCTGCTCGGCCAGGCGCTGCAGCTGACCAACATCCTGCGCGACGTCGGCGAGGACGCGATGCGCGGGCGCATCTACCTGCCGGTGAACGAGTTGCAGCAATTCGGCGTGAAGGCCAATGAGATCCTGGAGCGCGAATACTCCGAGCGCTTCACCGCGCTGATGCGCTACCAGGCCGAACGCGCGCACCGCCTGTACGACGAGGCCCTGGCGCAGCTGCCGGCCGCCGACCGGCGGGCGCAGAAGCCCGGCCTGATGATGGCCAGCATCTACCGCACCCTGCTGCGCGAGATCGAGCGCGACAACTTCCAGGTGCTGCACCAGCGCGTCGAGCTCACGCCGCTGCGCAAGTTCTGGCTCGCCTGGAAGATGCAGGCGCTGGGGCGGATGTGA
PROTEIN sequence
Length: 167
LDYAGLQRYCHLVAGVVGEVAARIFGQTEAATTRYAHLLGQALQLTNILRDVGEDAMRGRIYLPVNELQQFGVKANEILEREYSERFTALMRYQAERAHRLYDEALAQLPAADRRAQKPGLMMASIYRTLLREIERDNFQVLHQRVELTPLRKFWLAWKMQALGRM*